Pairwise Alignments

Query, 510 a.a., sugar ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 513 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  445 bits (1145), Expect = e-129
 Identities = 234/500 (46%), Positives = 338/500 (67%), Gaps = 3/500 (0%)

Query: 8   SFAPPAEEDLLRLRGVGKRFPGVVALDGIDLDLRAGEVHAVCGENGAGKSTLMKIISGQY 67
           S A P  E LL   G+ K FPGVVALD +   L+ G VHA+ GENGAGKSTLMKI++G Y
Sbjct: 14  SGAVPNAEFLLAADGIRKEFPGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIY 73

Query: 68  RADEGTVCYRGAPVQFASTSEAQAAGIAIIHQELNLVPHLSVAENIYLAREPK-RGPFVD 126
           + D G +  +GAP++  S  +A   GIA+IHQELNL+ +++VAENI++ REPK R  F+D
Sbjct: 74  QPDNGEIRLKGAPIRLDSPLDALENGIAMIHQELNLMAYMTVAENIWIRREPKNRLGFID 133

Query: 127 YRTLNANARQCLQRIGLNVSPVTLVGALSIAQQQMVEIAKALSLDARVLIMDEPTSSLTE 186
           +  +       L+R+G+++ P T VG LS+A +QMVEIAKA+S ++ VLIMDEPTS+LTE
Sbjct: 134 HGEMYRRTETLLERLGIDLDPETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTE 193

Query: 187 SETVQLFRIIRELRADGVAILYISHRLDEMAEIVDRVTVLRDGRHIATSDFASTSINEIV 246
            E   LFRIIR+LR  G+ I+YI+H+++E+ EI D  +V RDG++I T      + ++I+
Sbjct: 194 REVEHLFRIIRDLRERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDII 253

Query: 247 ARMVGRPLDDAYPPRQSTPTGELLLRVRDLQRTGTFGPVSFELRKGEILGFAGLMGAGRT 306
             MVGR +   + P++  P G+++L V++L   G F  VSF++R GEILG AGL+G+GR+
Sbjct: 254 RMMVGREITQMF-PKEEVPIGDVVLSVKNLNLDGVFHDVSFDVRAGEILGVAGLVGSGRS 312

Query: 307 EVARAIFGADRPDSGSILLGDTPVSIGSPREAIRHGIAYLSEDRKKDGLALSMPVSANIT 366
            VA  +FG     SG+I +   PVSI SP  AI H +A+L+EDRK  G  L + +  N+ 
Sbjct: 313 NVAETVFGVTPASSGTISIDGKPVSIDSPTTAISHRMAFLTEDRKDTGCLLILNILENMQ 372

Query: 367 LANVR-AISSRGFLRFSEEAAVAGRYVRELGIRTPTVRQIAKNLSGGNQQKIVISKWLYR 425
           +A ++    + GF++ +  +       R+L ++TP + +  +NLSGGNQQK++I +W+  
Sbjct: 373 IAVLQDKYVANGFVQENALSEACEEMCRKLRVKTPHLYERIENLSGGNQQKVLIGRWMLT 432

Query: 426 GSRILFFDEPTRGIDVGAKYAIYGLMDRLASDGVGVVLISSELPELLGMTDRIAVFHEGR 485
             RIL  DEPTRGIDVGAK  I+ L+  +A  GV V++ISSE+PE+LGM+DR+ V HEGR
Sbjct: 433 KPRILILDEPTRGIDVGAKAEIHKLVCEMARQGVAVIMISSEMPEVLGMSDRVMVMHEGR 492

Query: 486 ITAVLETSQTSQEEILHHAS 505
           +T  L  S+ +Q +++  AS
Sbjct: 493 VTGFLARSEATQVKVMDLAS 512



 Score = 88.6 bits (218), Expect = 5e-22
 Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 9/249 (3%)

Query: 263 STPTGELLLRVRDLQR----TGTFGPVSFELRKGEILGFAGLMGAGRTEVARAIFGADRP 318
           + P  E LL    +++          V F L++G +    G  GAG++ + + + G  +P
Sbjct: 16  AVPNAEFLLAADGIRKEFPGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQP 75

Query: 319 DSGSILLGDTPVSIGSPREAIRHGIAYLSEDRKKDGLALSMPVSANITLANVRAISSRGF 378
           D+G I L   P+ + SP +A+ +GIA + ++     L   M V+ NI +      +  GF
Sbjct: 76  DNGEIRLKGAPIRLDSPLDALENGIAMIHQELN---LMAYMTVAENIWIRR-EPKNRLGF 131

Query: 379 LRFSEEAAVAGRYVRELGIRTPTVRQIAKNLSGGNQQKIVISKWLYRGSRILFFDEPTRG 438
           +   E        +  LGI      ++ + LS  ++Q + I+K +   S +L  DEPT  
Sbjct: 132 IDHGEMYRRTETLLERLGIDLDPETRVGE-LSVASRQMVEIAKAVSYNSDVLIMDEPTSA 190

Query: 439 IDVGAKYAIYGLMDRLASDGVGVVLISSELPELLGMTDRIAVFHEGRITAVLETSQTSQE 498
           +       ++ ++  L   G+G+V I+ ++ EL  + D  +VF +G+      ++  +++
Sbjct: 191 LTEREVEHLFRIIRDLRERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRD 250

Query: 499 EILHHASGR 507
           +I+    GR
Sbjct: 251 DIIRMMVGR 259