Pairwise Alignments

Query, 565 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

Subject, 626 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score =  349 bits (895), Expect = e-100
 Identities = 239/587 (40%), Positives = 303/587 (51%), Gaps = 82/587 (13%)

Query: 37  TFAELGLSAEIVSALTAAGYKNPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIE 96
           +FA LGLS  +V A+ AAGY  PTPVQQRAIPA + GRDL+V++ TG+GKT  F LP +E
Sbjct: 2   SFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61

Query: 97  RFAQLQKAQTSQPREPRESNAAGARGRRPQPVARPGLLVLTPTRELAMQVTTAASTYGKH 156
           R         SQ   PR+                P +LVLTPTRELA QV  +   Y + 
Sbjct: 62  RLFPNGHPDKSQRHGPRQ----------------PRVLVLTPTRELAAQVHDSFKLYARD 105

Query: 157 LRRLRTVSILGGVAYGQQLMLLAKNPEILVATPGRLLDHLERGRIDLSQLQMLVLDEADR 216
           L+ + +  I GGV    Q+  +++  ++LVA PGRLLD   +G +DLS +++LVLDEADR
Sbjct: 106 LKFV-SACIFGGVGMNPQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADR 164

Query: 217 MLDMGFIDDIETIVAATPATRQTMLFSATLDGKIGSLTGRLLKDPERIEIKQHIEQRTNI 276
           MLDMGF+ D++ ++A  PA RQ +LFSAT    I +L G+LL +PERIE+         I
Sbjct: 165 MLDMGFVHDVKKVLARLPAKRQNLLFSATFSQDITALAGKLLHNPERIEVTPPNTTVERI 224

Query: 277 AQTVHYVDDRDHKDRLLDHLLRADGLDQAIVFTATKMDADQLAGRLADAGFESAALHGDL 336
            Q V  +    HK  LL HL+ A   +Q +VFT TK  A++LA  L   G  + A+HG+ 
Sbjct: 225 EQRVFRLA-ASHKRALLAHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNK 283

Query: 337 PQGARNRTIRALRERRVRVLVATDVAARGIDIPGITHVFNYDLPKFAEDYVHRIGRTGRA 396
            Q AR + +   +   VR+LVATD+AARG+DI  + HV N++LP   EDYVHRIGRTGRA
Sbjct: 284 SQNARTKALADFKAGSVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRA 343

Query: 397 GRSGIAVSLVHHAEQGALKRIERFVRAPLPVNVVEGF----------EPRKSP----PAN 442
           GRSG A+SLV   E+  LK IER  +  +    + GF          E R+ P    P N
Sbjct: 344 GRSGEAISLVAPDEEKLLKSIERMTKQKIADGDLMGFDASAVEAEKPEARERPDVRNPRN 403

Query: 443 GRGGFGGRGRPGGGNGGGRRFGGK-PGYGGSRDGNGGGYGSRDGNRGGYGAR-------- 493
            RG   G G  GGG GGGRR  GK  G   S  G G         R G  AR        
Sbjct: 404 PRGP-KGDGPNGGGGGGGRRDKGKDKGKEKSASGRGERPAREQKPREGTPAREQRQPSQP 462

Query: 494 ---------------DGGNGGN----------------------GGNSAGRSWGDKPAGG 516
                          D  N GN                       G  AG   G +P GG
Sbjct: 463 PRAAADRAPDEFLDDDVDNFGNRVDYVPQAKPAQGRGRRPGAPAQGAGAGAPRGGQPQGG 522

Query: 517 NREGGYNSGSREGGYRSEGYRGNREGGYSRDGGYGARRNDGPRNSRR 563
            + G  NS     G       G R G   RDG   ARR D   N+RR
Sbjct: 523 RQNGPRNSSGGTTGTPPAKRNGPRNGA-PRDG--QARREDSRSNNRR 566