Pairwise Alignments

Query, 565 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

Subject, 655 a.a., ATP-dependent RNA helicase NGO0650 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  372 bits (956), Expect = e-107
 Identities = 252/633 (39%), Positives = 329/633 (51%), Gaps = 96/633 (15%)

Query: 14  ADQALGLDTPETAVQAPEVA--TGPT-FAELGLSAEIVSALTAAGYKNPTPVQQRAIPAG 70
           AD    + T  T V+A E     GP  F  LGL+ E+V A    GY  PT VQ   IP  
Sbjct: 18  ADTEADVSTTTTTVEATEPVEPAGPNGFELLGLAPELVQACADLGYVQPTTVQNNVIPKA 77

Query: 71  IAGR------DLLVSSPTGSGKTAAFMLPAIERFAQLQKAQTSQPREPRESNAAGARGRR 124
           +         D++VSS TGSGKTAAF+LP +    Q + A  +Q R  RE   A A  R 
Sbjct: 78  MLAEGEQRFADMMVSSQTGSGKTAAFLLPVLHTLLQQRAAADAQERADRERAVAEALARG 137

Query: 125 PQP----------------VARPGLLVLTPTRELAMQVTTAASTYGKHLRRLRTVSILGG 168
             P                 A PG L+L PTRELA QV   A    +H R LR  +++GG
Sbjct: 138 EAPPKAPKRKDPTSPRNFKAATPGALILCPTRELAQQVAHDAIDLVRHCRGLRIANVVGG 197

Query: 169 VAYGQQLMLLAKNPEILVATPGRLLDHLERGRIDLSQLQMLVLDEADRMLDMGFIDDIET 228
           + Y  Q+  L +N +++VATPGRLLD     ++ L Q+Q LV+DEADRMLD+GF DD+  
Sbjct: 198 MPYQLQIARL-QNADLVVATPGRLLDLQRSQQLKLDQVQFLVVDEADRMLDLGFSDDLAE 256

Query: 229 IVAATPATRQTMLFSATLDGKIGSLTGRLL----KDPERIEIKQHIEQRTNIAQTVHYVD 284
           +   T   RQTM+FSAT   +I  L  R++    K  ++++I    EQ  NI Q + + D
Sbjct: 257 VNELTSQRRQTMMFSATFAPRIQQLAMRVMHENGKHVQKVQIDTPQEQHANIKQVLFWAD 316

Query: 285 DRDHKDRLLDHLLRADGLDQAIVFTATKMDADQLAGRLADAGFESAALHGDLPQGARNRT 344
             DHK +LLDH LR   ++QA+VF +T+++ D LA  L  AGF + ALHG L QG RNR 
Sbjct: 317 HADHKRKLLDHWLRDTTINQAVVFCSTQIECDGLANDLQQAGFAAVALHGALNQGMRNRR 376

Query: 345 IRALRERRVRVLVATDVAARGIDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVS 404
           + ALR  +V++LVATDVAARGID+P ITHVFN+ LP  AEDY HRIGRTGRAGR G+AV+
Sbjct: 377 LMALRAGQVQILVATDVAARGIDVPTITHVFNFGLPMKAEDYTHRIGRTGRAGRDGLAVT 436

Query: 405 LVHHAEQGALKRIERFVRAPLPVNVVEGFEPRKSPPANGRGGFGGRGRPGGGNGGGRRFG 464
                ++  +  IE + R  + V  V G EPR+  P   +  FGGRGRPG G G   RFG
Sbjct: 437 FAEFRDRRKIGDIEAYTRQRINVETVPGLEPRQRAP---QPEFGGRGRPGAGRGD--RFG 491

Query: 465 G--------------------KPGYGGSRDGNGGG------------------------- 479
           G                     P + G  +G   G                         
Sbjct: 492 GGGDRNYADRSNFNARGPAPRGPRFEGRPEGRPEGRFDAPRPDHSRPGARFDPRFEGRAE 551

Query: 480 ----YGSRDGNRGGYGARDGGNGG---NGGNSAGRSWGDKPAG----GNREGGYNSGSR- 527
                 +R  NRG     + G+ G   N    A R +GD+ A     G + GG++S  R 
Sbjct: 552 PQPRQENRFDNRGENRFENRGDQGGYRNDTRPASRGFGDRGAAPARTGGKPGGFSSFGRS 611

Query: 528 -EGGYRSEGY--RGNREGGYSRDGGYGARRNDG 557
            +GG    G+  RGN E G  R G +  RRN+G
Sbjct: 612 DKGGESRGGFSDRGNAERGAMR-GDFAPRRNEG 643