Pairwise Alignments

Query, 565 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

Subject, 454 a.a., ATP-dependent RNA helicase from Escherichia coli BL21

 Score =  336 bits (861), Expect = 1e-96
 Identities = 200/451 (44%), Positives = 265/451 (58%), Gaps = 36/451 (7%)

Query: 37  TFAELGLSAEIVSALTAAGYKNPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIE 96
           +F  LGLS +I+ A+   GY+ PTP+QQ+AIPA + GRDL+ S+ TG+GKTA F LP   
Sbjct: 2   SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL-- 59

Query: 97  RFAQLQKAQTSQPREPRESNAAGARGRRPQPVARPGLLVLTPTRELAMQVTTAASTYGKH 156
               LQ   T QP          A+GRRP        L+LTPTRELA Q+      Y K+
Sbjct: 60  ----LQHLITRQPH---------AKGRRPVRA-----LILTPTRELAAQIGENVRDYSKY 101

Query: 157 LRRLRTVSILGGVAYGQQLMLLAKNPEILVATPGRLLDHLERGRIDLSQLQMLVLDEADR 216
           L  +R++ + GGV+   Q+M L    ++LVATPGRLLD   +  + L Q+++LVLDEADR
Sbjct: 102 LN-IRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR 160

Query: 217 MLDMGFIDDIETIVAATPATRQTMLFSATLDGKIGSLTGRLLKDPERIEIKQHIEQRTNI 276
           MLDMGFI DI  ++   PA RQ +LFSAT    I +L  +LL +P  IE+ +       +
Sbjct: 161 MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQV 220

Query: 277 AQTVHYVDDRDHKDRLLDHLLRADGLDQAIVFTATKMDADQLAGRLADAGFESAALHGDL 336
            Q VH+VD +  K  LL H++      Q +VFT TK  A+ LA +L   G  SAA+HG+ 
Sbjct: 221 TQHVHFVDKK-RKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNK 279

Query: 337 PQGARNRTIRALRERRVRVLVATDVAARGIDIPGITHVFNYDLPKFAEDYVHRIGRTGRA 396
            QGAR R +   +   +RVLVATD+AARG+DI  + HV NY+LP   EDYVHRIGRTGRA
Sbjct: 280 SQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

Query: 397 GRSGIAVSLVHHAEQGALKRIERFVRAPLPVNVVEGFEP----RKSPPANGR--GGFGGR 450
             +G A+SLV   E   L+ IE+ ++  +P   + G+EP    +  P  NGR   G GGR
Sbjct: 340 AATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399

Query: 451 GRPGG--------GNGGGRRFGGKPGYGGSR 473
           G+ GG        G GG +    KP    SR
Sbjct: 400 GQGGGRGQQQPRRGEGGAKSASAKPAEKPSR 430