Pairwise Alignments

Query, 734 a.a., ATP-dependent helicase from Paraburkholderia sabiae LMG 24235

Subject, 728 a.a., DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex from Pseudomonas putida KT2440

 Score =  275 bits (702), Expect = 8e-78
 Identities = 217/657 (33%), Positives = 318/657 (48%), Gaps = 82/657 (12%)

Query: 32  LAKLNEAQREAVEYGTDDVAKPSGALLVIAGAGSGKTNTLAHRVANLV-VKGTDPRRILL 90
           L  LN+AQR+AV       A   G  LV+AGAGSGKT  L HR+A L+ V+   P  IL 
Sbjct: 10  LNSLNDAQRQAV-------AATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSILS 62

Query: 91  LTFSRRAALEMTRRVTRIASAALGTRAALAQGLTWSGTFHSVGARLLREYADLIGLSPTF 150
           +TF+ +AA EM +R+ ++    LG   A   G+ W GTFH +  RLLR +     L   F
Sbjct: 63  VTFTNKAAAEMRQRIEQL----LGINPA---GM-WVGTFHGLAHRLLRAHWQEARLVQNF 114

Query: 151 TINDREDSADLMNLVRHELGFSAKEKRFPSKSACFAIYSRV--------VNTGASLADVL 202
            I D +D   L+  V  ELG    E+++P++ A + I  +         +  G  L    
Sbjct: 115 QILDSDDQQRLIKRVMRELGLD--EQKWPARQAQWFINGQKDEGLRPQHIQAGGDL---- 168

Query: 203 NSAFPWCREWEADLRMLFAAYVDAKQKQSVLDYDDLLLYWSHMAAE-PAIAADLSGRFDH 261
                    + A +R ++ AY  A ++  V+D+ +LLL    +  + P +      RF H
Sbjct: 169 ---------FLATMREVYTAYEQACERAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRH 219

Query: 262 VLVDEYQDTNRLQASILLALKPDGRGLTVVGDDAQSIYSFRGATVRNILDFPAHFDPPAK 321
           VLVDE+QDTN +Q + L  L   G  L  VGDD QSIY +RGA + NI  + A F P A+
Sbjct: 220 VLVDEFQDTNAVQYAWLRLLARGGDSLMAVGDDDQSIYGWRGAKIENIHQYTADF-PDAE 278

Query: 322 QVTLERNYRSTQPILEASNAVIDLSTERYTKNLWTDKASAQRPHLVTVADDADQARYIVE 381
            + LE+NYRST  IL+A+NA+I  ++ R  K LWTD    +   L    ++ D+ARY+VE
Sbjct: 279 MIRLEQNYRSTGGILKAANALIANNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVE 338

Query: 382 QVLAAREAGMKLKSQAVLFRAAHHSATLEIELTRRNIPFVKFGGLKFLDSVHVKDVLAVL 441
            + +  + G      A+L+R+   S  LE  L R  IP+  +GG +F +   +K+ +A L
Sbjct: 339 TIESLVKQGNARNEIAILYRSNAQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYL 398

Query: 442 RWAENPRDRVAGFRVVQLLP-GVGPATAARVLDDIAARADALGSGSA---LDVAHGVSGC 497
           R  E   +  A  RV+ + P G+G  T   + +   AR   L    A   L  A  + G 
Sbjct: 399 RLIEGRGNDAALERVINVPPRGIGEKTVEAIREH--ARHSQLSMWEAMCQLIAAKALKGR 456

Query: 498 AAGALAAFAPPARTLEDWHLFVAMMASVCGRQTPWPAEFEMVRRWYEP------HLERNH 551
           AA AL A             F+ ++  +  +    P    M +   E       H E   
Sbjct: 457 AASALGA-------------FIELIEGLAAKVVDMPLH-TMTQTTIEQSGLITYHQEEKG 502

Query: 552 EDASIRQADLVQMESIAGTYASRER---------FLTELTLDPPDATSDESGVPLIDEDY 602
           E    R  +L ++ S A  + S +          FL   +L+  D  +DE       ED 
Sbjct: 503 EKGQARVENLEELVSAARNFESTDEDADLSPLSAFLGHASLEAGDTQADE------HEDS 556

Query: 603 LILSTIHSAKGQEWRNVFVLNGVDGCIPSDLGTGSEEEIDEERRLLYVAMTRAKEDL 659
           + L T+HSAKG E+  VF++   +G  P  +       ++EERRL YV +TRA   L
Sbjct: 557 IQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRLAYVGITRAMRQL 613