Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 475 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  259 bits (662), Expect = 1e-73
 Identities = 159/363 (43%), Positives = 219/363 (60%), Gaps = 29/363 (7%)

Query: 102 DYVTVPYSGDRIVDSVGHAY-------GMVSLGEPASNDASQGG---SEGEM--VGSCDA 149
           DY+  P+  D ++ +V              +   PA   A + G   S GE+  +GSC  
Sbjct: 94  DYIAKPFDHDEMLQAVARILRDRQSPSSAPAEQRPAGKAADKPGVDNSNGEIGIIGSCPP 153

Query: 150 MLALFRSIRKVAMTDAPVFISGESGTGKELTAVAIHERSSRRNAPFIPINCGAIPPHLLQ 209
           M  L+  IRKVA TD+ V I GESGTGKEL A A+H  S R  AP I +NC AIP  L++
Sbjct: 154 MQDLYGKIRKVAPTDSNVLIQGESGTGKELVARALHNLSKRAKAPMISVNCAAIPESLIE 213

Query: 210 SELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIGDLPLESQASLLRFLQERKVERLGG 269
           SELFG+E+GAFTGA+  + G VEAA+GGTLFLDEIG+LPLE+QA LLR LQE ++ R+G 
Sbjct: 214 SELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGS 273

Query: 270 HGSIEVDVRIISATHVDMNTAMIEGRFRSDLYHRLCVLQIDEPPLRARGKDIELLARHML 329
             S +VDVR+I+ATH D+ +    G+FR DLY+RL V+ +  P LR RG D+  +A   L
Sbjct: 274 VQSQKVDVRLIAATHRDLKSLAKIGQFREDLYYRLHVIALKLPALRERGADVNEIAHAFL 333

Query: 330 ERFRKDASRRLRGFAPDAIAALHNYSWPGNVRELINRVRRAIVMSEGRAITAR----DLE 385
            R     +R    FAPDA  A+ +YSWPGNVREL N V RA+++SE   I+A     D+E
Sbjct: 334 LRQSARINRTDLKFAPDAEQAIRHYSWPGNVRELENAVERAVILSESPEISAELLGIDIE 393

Query: 386 LAEYVEIVPVSLAQAR-------EAAERQAIE----LALLRHRGRLGDA--AQELGISRV 432
           L++  +   + LA ++       E  E  ++E      +L H+  + +   A++LG+SR 
Sbjct: 394 LSDLEDDDFIGLAPSQGGSNTSHEPTEDLSLEDYFQHFVLEHQDHMTETELARKLGVSRK 453

Query: 433 TLY 435
            L+
Sbjct: 454 CLW 456