Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 441 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  340 bits (871), Expect = 7e-98
 Identities = 183/381 (48%), Positives = 248/381 (65%), Gaps = 4/381 (1%)

Query: 66  AFESCLTMPNVGWVATTMAGQLQDAALRRLVRDYCFDYVTVPYSGDRIVDSVGHAYGMVS 125
           A +  ++     W+A      L+   +   V ++ FD+ T+P+   R+  ++G A+GM  
Sbjct: 63  AVKELISRSGTEWIAVLSQDVLRLQNVGDFVCEWFFDFHTLPFDVARVQVTLGRAFGMAR 122

Query: 126 LGEPASNDASQGGSEGEMVGSCDAMLALFRSIRKVAMTDAPVFISGESGTGKELTAVAIH 185
           L         +   E E++G    +  L + + K+A T++PV I G+SGTGKEL A  +H
Sbjct: 123 LRGKGYTAVDE--PEHELLGDSRPIRELRKLLSKLAPTESPVLIRGDSGTGKELVAKTLH 180

Query: 186 ERSSRRNAPFIPINCGAIPPHLLQSELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIG 245
            +S R   PF+ INCGAIP HL+QSELFG+E+GAFTGA+QRKIGR+EAANGGTLFLDEIG
Sbjct: 181 RQSQRHAKPFVAINCGAIPEHLIQSELFGHEKGAFTGAHQRKIGRIEAANGGTLFLDEIG 240

Query: 246 DLPLESQASLLRFLQERKVERLGGHGSIEVDVRIISATHVDMNTAMIEGRFRSDLYHRLC 305
           DLP+E QA+LLRFLQE+++ER+GG   I VDVR+++ATHVD+  A+ +G FR DLY+RL 
Sbjct: 241 DLPMELQANLLRFLQEKQIERVGGSQPIPVDVRVLAATHVDLEAAVEKGTFREDLYYRLN 300

Query: 306 VLQIDEPPLRARGKDIELLARHMLERFRKDASRRLRGFAPDAIAALHNYSWPGNVRELIN 365
           VLQ+   PLR R  DI +LA H    + ++  RR R F+ DA+ A+  ++WPGNVREL N
Sbjct: 301 VLQVVTAPLRERHGDIAMLANHFSRFYSQETGRRPRSFSDDALVAMGEHAWPGNVRELAN 360

Query: 366 RVRRAIVMSEGRAITARDLELAEYVEIVP--VSLAQAREAAERQAIELALLRHRGRLGDA 423
           RVRR +V++EGR I A DL L     I P   +L   +  AERQA+   L RH   L  A
Sbjct: 361 RVRRGLVLAEGRQIEAVDLGLQGQQAISPPMATLEDYKHRAERQALCDVLNRHSDNLSVA 420

Query: 424 AQELGISRVTLYRLLCSHGMR 444
           A+ LG+SR T YRLL  H +R
Sbjct: 421 ARVLGVSRPTFYRLLHKHQIR 441