Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 441 a.a., Response regulator of zinc sigma-54-dependent two-component system from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  263 bits (673), Expect = 7e-75
 Identities = 164/416 (39%), Positives = 236/416 (56%), Gaps = 13/416 (3%)

Query: 26  RGW--HVEVVGSARDARRAVRSGMAAGGLLDLSSCFQQHEIAAFESCLTMPNVGWVATTM 83
           RGW  +V +  S  DA   VR  +    L D+            E     P +  +  T 
Sbjct: 26  RGWGYNVALAYSGHDALAQVREKVFDLVLCDVRMAEMDGIATLKEIKALNPAIPILIMTA 85

Query: 84  AGQLQDAALRRLVRDYCFDYVTVPYSGDRIVDSVGHAYGMVSLGEPASNDASQGGSEGEM 143
              ++ A     ++    DY+  P   DR+ +++  A  +    E  +   S   ++  M
Sbjct: 86  FSSVETAV--EALKAGALDYLIKPLDFDRLQETLEKA--LAHTRETGAELPSASAAQFGM 141

Query: 144 VGSCDAMLALFRSIRKVAMTDAPVFISGESGTGKELTAVAIHERSSRRNAPFIPINCGAI 203
           +GS  AM  L   I  VA +DA V I G+SGTGKEL A A+H  S+R + P + +NC A+
Sbjct: 142 IGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCAAL 201

Query: 204 PPHLLQSELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIGDLPLESQASLLRFLQERK 263
              LL+SELFG+E+GAFTGA++R+ GR   A+GGTLFLDEIGD+    Q  LLR +QER+
Sbjct: 202 NESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQERE 261

Query: 264 VERLGGHGSIEVDVRIISATHVDMNTAMIEGRFRSDLYHRLCVLQIDEPPLRARGKDIEL 323
           V+R+G + +I VDVR+I+ATH D+   +  GRFR DLY+RL V+ I+ P LR R +DI L
Sbjct: 262 VQRVGSNQTISVDVRLIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPL 321

Query: 324 LARHMLERFRKDASRRLRGFAPDAIAALHNYSWPGNVRELINRVRRAIVMSEGRAITARD 383
           LA H L RF +   + ++GF P A+  L +Y WPGN+REL N + RA+V+  G  I+ R+
Sbjct: 322 LADHFLRRFAERNRKVVKGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYISERE 381

Query: 384 LELAEYVEIVPVSLAQAREA-----AERQAIELALLRHRGRLGDAAQELGISRVTL 434
           L LA  +   P+    + E       E++ I  AL +  G   +AA++LGI+R TL
Sbjct: 382 LPLA--IAATPIKTEYSGEIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTL 435