Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 441 a.a., fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  264 bits (674), Expect = 5e-75
 Identities = 168/418 (40%), Positives = 236/418 (56%), Gaps = 17/418 (4%)

Query: 26  RGW--HVEVVGSARDARRAVRSGMAAGGLLDLSSCFQQHEIAAFESCLTMPNVGWVATTM 83
           RGW  +V +  S R A   VR  +    L D+            E     P +  +  T 
Sbjct: 26  RGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTA 85

Query: 84  AGQLQDAALRRLVRDYCFDYVTVPYSGDRIVDSVGHAYGMVSL--GEPASNDASQGGSEG 141
              ++ A     ++    DY+  P   D +  ++  A         E  +  ASQ G   
Sbjct: 86  YSSVETAV--EALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVTASQFG--- 140

Query: 142 EMVGSCDAMLALFRSIRKVAMTDAPVFISGESGTGKELTAVAIHERSSRRNAPFIPINCG 201
            MVG   AM  L   I  VA ++A V I G+SGTGKEL A AIH  S+R   P + +NC 
Sbjct: 141 -MVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCA 199

Query: 202 AIPPHLLQSELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIGDLPLESQASLLRFLQE 261
           A+   LL+SELFG+E+GAFTGA++R+ GR   A+GGTLFLDEIGD+    Q  LLR +QE
Sbjct: 200 ALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQE 259

Query: 262 RKVERLGGHGSIEVDVRIISATHVDMNTAMIEGRFRSDLYHRLCVLQIDEPPLRARGKDI 321
           R+V+R+G + +I VDVR+I+ATH D+   +  GRFR DLY+RL V+ I+ P LR R +DI
Sbjct: 260 REVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDI 319

Query: 322 ELLARHMLERFRKDASRRLRGFAPDAIAALHNYSWPGNVRELINRVRRAIVMSEGRAITA 381
            LLA H L+RF +   + ++GF P A+  L +Y WPGN+REL N V RA+V+  G  I+ 
Sbjct: 320 PLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISE 379

Query: 382 RDLELAEYVEIVPVSLAQARE-----AAERQAIELALLRHRGRLGDAAQELGISRVTL 434
           R+L LA  +   P+ L Q+++       E++ I  AL +  G   +AA++LGI+R TL
Sbjct: 380 RELPLA--IASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTL 435