Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  256 bits (653), Expect = 1e-72
 Identities = 153/357 (42%), Positives = 211/357 (59%), Gaps = 14/357 (3%)

Query: 101 FDYVTVPYSGDRIVDSVGHAYGMVSLGEPASN---DASQGGSEGEMVGSCDAMLALFRSI 157
           FDYV  P+  D +   V  A  + S+ +   +     S     G ++ +  AM+ + +  
Sbjct: 100 FDYVIKPFDLDELNLIVQRALQLQSMKKEIRHLHQALSTSWQWGHILTNSPAMMDICKDT 159

Query: 158 RKVAMTDAPVFISGESGTGKELTAVAIHERSSRRNAPFIPINCGAIPPHLLQSELFGYER 217
            K+A++ A V ISGESGTGKEL A AIH  S R   PFI +NC A+P  LL+SELFG+E+
Sbjct: 160 AKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEK 219

Query: 218 GAFTGANQRKIGRVEAANGGTLFLDEIGDLPLESQASLLRFLQERKVERLGGHGSIEVDV 277
           GAFTGA   + G  E AN GTL LDEIG++PL  QA LLR LQER+ ER+GGH +I+VD+
Sbjct: 220 GAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDI 279

Query: 278 RIISATHVDMNTAMIEGRFRSDLYHRLCVLQIDEPPLRARGKDIELLARHMLERFRKDAS 337
           RII+AT+ D+   + EG FR DL++RL V+ +  PPLR R +DI LLA H L++F  +  
Sbjct: 280 RIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQ 339

Query: 338 RRLRGFAPDAIAALHNYSWPGNVRELINRVRRAIVMSEGRAITARDLE--------LAEY 389
           R +    P A++ L  +SWPGN+REL N + RA+VM+ G  I + DL          A  
Sbjct: 340 RDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGE 399

Query: 390 VEIVPV---SLAQAREAAERQAIELALLRHRGRLGDAAQELGISRVTLYRLLCSHGM 443
           V+  PV   +L +  +  E++ I   L +  G     A  LGISR  L   L  +G+
Sbjct: 400 VKTAPVGERNLKEEIKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGI 456