Pairwise Alignments

Query, 875 a.a., DNA gyrase subunit A from Paraburkholderia sabiae LMG 24235

Subject, 875 a.a., DNA gyrase (type II topoisomerase), subunit A from Escherichia coli BL21

 Score = 1020 bits (2637), Expect = 0.0
 Identities = 516/871 (59%), Positives = 662/871 (76%), Gaps = 11/871 (1%)

Query: 1   MDQFAKETLPISLEEEMRRSYIEYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
           M   A+E  P+++EEE++ SY++YAMSVIVGRALPDVRDGLKPVHRRVLYAM+ L NDWN
Sbjct: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60

Query: 61  RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
           +AYKKSAR+VGDVIGKYHPHGDSAVYDTIVRMAQ FSLRYMLVDGQGNFGS+DGD+AAAM
Sbjct: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120

Query: 121 RYTEIRMAKIGHELLADIDKETVDFQPNYDGSENEPSILPARIPNLLINGSSGIAVGMAT 180
           RYTEIR+AKI HEL+AD++KETVDF  NYDG+E  P ++P +IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180

Query: 181 NIPPHNLNEIVDACHHLLKNPEATIDELIEIVPAPDFPTAGIIYGVQGVRDGYRTGRGRV 240
           NIPPHNL E+++ C   + + + +I+ L+E +P PDFPTA II G +G+ + YRTGRG+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240

Query: 241 VMRATTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
            +RA    E   +  R  IIV E+PYQVNK  L+E+IAELV EK++EGIS +RDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300

Query: 301 MRVVIELKRGEVPEVILNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSHFLSHRRE 360
           MR+VIE+KR  V EV+LNNLY  TQLQ +FG+NMVAL  GQPK++NLK++++ F+ HRRE
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360

Query: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMDRSWDSSIV 420
           V+TRRT++ELRKAR+R H+LE LAVALANID  I +I+ APTP  AK  L+   W    V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420

Query: 421 REMLQRAEADNATSGGRAAYRPEGLNPAYGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
             ML+RA        G  A RPE L P +G++ DGLY L++ QAQ IL +RLQ+LTGLE 
Sbjct: 421 AAMLERA--------GDDAARPEWLEPEFGVR-DGLYYLTEQQAQAILDLRLQKLTGLEH 471

Query: 481 DKIIGEYRDVMAQIADLLDILARPERITSIIFDELVTIKSEFGDERRSKIEMNATELNTE 540
           +K++ EY++++ QIA+LL IL   +R+  +I +EL  ++ +FGD+RR++I  N+ ++N E
Sbjct: 472 EKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLE 531

Query: 541 DLITPQDMVVTMSHSGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIDTLFIANTHDHIL 600
           DLIT +D+VVT+SH GYVK QPLSEY AQ+RGG+GK A ++KE+D+ID L +ANTHDHIL
Sbjct: 532 DLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHIL 591

Query: 601 CFSNRGRVYWLKVYEVPQGSRNSRGRPIVNMFPLQEGEKITVVLPVKEFSADKFVFMATA 660
           CFS+RGRVY +KVY++P+ +R +RGRPIVN+ PL++ E+IT +LPV EF     VFMATA
Sbjct: 592 CFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATA 651

Query: 661 LGTVKKTPLEAFSRPLKKGIIAVGLDDGDYLIGAAITDGEHDVMLFSDSGKAVRFDENDV 720
            GTVKKT L  F+R    G +A+ L +GD LIG  +T GE +VMLFS  GK VRF E+ V
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711

Query: 721 RPMGREARGVRGMQLEDGQSVIALLVAGDEQQSVLTATENGYGKRTPITEYTRHGRGTKG 780
           R MG    GVRG++L +G  V++L+V   E  ++LTAT+NGYGKRT + EY    R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGE-GAILTATQNGYGKRTAVAEYPTKSRATKG 770

Query: 781 MIAIQTSERNGKVVAATLVDPEAQIMLITNTGVLIRTRVSEIREMGRATQGVTLISLDEG 840
           +I+I+ +ERNG VV A  VD   QIM+IT+ G L+RTRVSEI  +GR TQGV LI   E 
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830

Query: 841 TKLSGLQQIAEAEADVDGDADLPADEAGGDE 871
             + GLQ++AE   + D D  +    A GD+
Sbjct: 831 ENVVGLQRVAEPVDEEDLDT-IDGSAAEGDD 860