Pairwise Alignments

Query, 145 a.a., transcription antitermination factor NusB from Paraburkholderia sabiae LMG 24235

Subject, 166 a.a., antitermination protein NusB from Pseudomonas simiae WCS417

 Score =  132 bits (333), Expect = 2e-36
 Identities = 69/139 (49%), Positives = 92/139 (66%)

Query: 5   RRRSRELATQGLYQWLLSGSPAGEIDAQLRGAQGYDKADHEHLDAILHGVIRDSEALSAD 64
           RR +R+LATQ LYQ  L+G+   EI+AQ R    +  AD  +   ILHGV      +   
Sbjct: 28  RRAARQLATQALYQRHLAGASLNEIEAQFRVDNDFTFADLPYFHDILHGVHAHLTEIDTA 87

Query: 65  LAPCLDRPIDQLSPVERAVLLVAAYELKNHIDIPYRVVINEAVELAKTFGGADGYKYVNG 124
           LAPCLD  I++L PVE  V+ ++A+EL   +D+PYRVVINE +ELAK +G  DG+K+VNG
Sbjct: 88  LAPCLDLTIEELDPVELCVMRLSAWELLYRVDVPYRVVINEGIELAKVYGSTDGHKFVNG 147

Query: 125 VLDKLSAKLRVDETQAAAR 143
           VLDKL+ +LR  E +A  R
Sbjct: 148 VLDKLAPRLREAEVKAYKR 166