Pairwise Alignments

Query, 145 a.a., transcription antitermination factor NusB from Paraburkholderia sabiae LMG 24235

Subject, 166 a.a., transcription antitermination protein from Pseudomonas putida KT2440

 Score =  129 bits (323), Expect = 3e-35
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 1/143 (0%)

Query: 2   KSARRR-SRELATQGLYQWLLSGSPAGEIDAQLRGAQGYDKADHEHLDAILHGVIRDSEA 60
           KSA+RR +R+LATQ LYQW ++     EI+AQ R    +   D  +   ILHGV      
Sbjct: 24  KSAKRREARKLATQALYQWHMAQHSLNEIEAQFRVDNDFTDVDGAYFREILHGVPAIKGE 83

Query: 61  LSADLAPCLDRPIDQLSPVERAVLLVAAYELKNHIDIPYRVVINEAVELAKTFGGADGYK 120
           +   L PC+   +++L PVE AVL ++ +EL   +D+PYRVVINE VELAK FG  DG+K
Sbjct: 84  IDKALVPCMTIALEELDPVELAVLRLSTWELIKRVDVPYRVVINEGVELAKVFGATDGHK 143

Query: 121 YVNGVLDKLSAKLRVDETQAAAR 143
           +VNGVLDKL+  LR  E +A  R
Sbjct: 144 FVNGVLDKLAPALREAEVKANKR 166