Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 181 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

 Score = 82.8 bits (203), Expect = 3e-21
 Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 2/160 (1%)

Query: 20  AGKRDMQRLLYDLYSKKMM-AVCLRYAPTTFEAEDIMQDAFVKVFNNLQTFKRDCPVEFW 78
           AG R   + LY L+  ++  AVC         AED+ QDAF++ +  L  F+ +     W
Sbjct: 19  AGDRQAFQRLYRLHVGRVHGAVCRLAGYDHARAEDLTQDAFIRAWQKLPGFRHESAFGTW 78

Query: 79  IRRIMINTALKHLRSKQLLTVSHESEEVANLSADDVNLSGYSLDELLSMIQSLAPRYRMV 138
           + R+ +N AL  +R++    VS   +E                +EL   I  L PR R V
Sbjct: 79  LYRLAVNVALMDIRARGADPVSMLDDEHLP-DTGQTPFCAAEREELERAIARLPPRARAV 137

Query: 139 FNLYAIEGYNHKEIGEMLGISEGTSKSQYSRARVILQNML 178
             L+ IEG+ H+EIG  LG++ GTSK+Q  RAR +L+ +L
Sbjct: 138 LVLHDIEGWRHEEIGGELGMAIGTSKAQLHRARALLRKIL 177