Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 182 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 74.7 bits (182), Expect = 9e-19
 Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 4/154 (2%)

Query: 27  RLLYDLYSKKMMAVCLRYAPTTFEAEDIMQDAFVKVFNNLQTFKRDCPVEFWIRRIMINT 86
           R+L + Y K++ ++  +      +A+D++Q+ FVK F N+  FKRD  +  W+ RI IN 
Sbjct: 24  RMLVNHYQKRIYSIIRKMVIIHEDADDLVQNTFVKAFKNINNFKRDSSLFTWLYRIAINE 83

Query: 87  ALKHLRSKQ---LLTVSHESEEVANLSADDVNLSGYSLDELL-SMIQSLAPRYRMVFNLY 142
            L  L  K+      +     ++A      +++ G  +  LL  ++  L  + R+VFN+ 
Sbjct: 84  CLNFLEKKKKRNFFRLEDHEHKMAGYLDSTLHIEGDEIQLLLQKLLLKLPKKQRLVFNMK 143

Query: 143 AIEGYNHKEIGEMLGISEGTSKSQYSRARVILQN 176
             E  ++ +I E+   SEG  K+ Y  A   ++N
Sbjct: 144 YFENLSYAQISEITKTSEGALKASYHHAVKKIEN 177