Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 203 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 65.1 bits (157), Expect = 8e-16
 Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 14/196 (7%)

Query: 4   FSKPKSDEEKLIDGCIAGK-RDMQRLLYDLYSKKMMAVCLRYAPTTFEAEDIMQDAFVKV 62
           FS    ++  LID  +  K +     L   Y K +  + L+      +AED+  +AF K 
Sbjct: 8   FSDKALEDFDLIDQAVDQKDQQAYATLMKRYKKAVYFMILKMIRDADDAEDLTMEAFAKA 67

Query: 63  FNNLQTFKRDCPVEFWIRRIMINTALKHLRSKQLLTVS------HESEEVANLSADDVN- 115
           F NL  FK+D     W+ RI  N  +  +R K+L T+S       +     N+  +D + 
Sbjct: 68  FRNLHKFKKDYTFSTWLFRIATNNTIDFIRKKKLKTMSLNNTLTDDGGNSVNIDVEDDDN 127

Query: 116 ------LSGYSLDELLSMIQSLAPRYRMVFNLYAIEGYNHKEIGEMLGISEGTSKSQYSR 169
                 +    ++ +   +  L  +YR +  L   +  ++ EI + L    GT K+Q  R
Sbjct: 128 NPQDEFIKSQRIEMVRIFVDKLPAKYRKLVKLRYFDELSYDEIAQELDKPLGTVKAQLHR 187

Query: 170 ARVILQNMLLRQEENI 185
           +R +L  +   +++ I
Sbjct: 188 SRELLYEIAQGKQKYI 203