Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 176 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 90.5 bits (223), Expect = 2e-23
 Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 5/172 (2%)

Query: 8   KSDEEKLIDGCIAGKRDMQRLLYDLYSKKMMAVCLRYAPTTFEAEDIMQDAFVKVFNNLQ 67
           ++ E+ LI  C    R  Q  L++ Y   + +   R       A D +Q+AF+++F  ++
Sbjct: 3   QNSEKDLITRCSKQDRKAQFELFERYKVALYSSVFRILNEEDLAHDALQEAFIEIFKGIK 62

Query: 68  TFKRDCPVEFWIRRIMINTALKHLRSKQLLTVSHESEEVANLSADDVNLSGYSLDELLSM 127
            F+ +C + FW++RI I  A+K  +S+ L T     ++V  L  D   L G+   ELL +
Sbjct: 63  KFRGECTLGFWMKRIAIRKAIKLAKSRILFT---PLDQVTAL-PDRTPLDGWIDGELLDV 118

Query: 128 -IQSLAPRYRMVFNLYAIEGYNHKEIGEMLGISEGTSKSQYSRARVILQNML 178
            I+ L    R VF L  +EGY H E   +L ISE TSKSQ S A+ +L+  L
Sbjct: 119 AIRELPTGCRSVFLLIEVEGYKHAECAALLSISENTSKSQLSYAKKLLRGKL 170