Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 196 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 61.2 bits (147), Expect = 1e-14
 Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 12/141 (8%)

Query: 50  EAEDIMQDAFVKVFNNLQTFKRDCPVEFWIRRIMINTALKHLR--SKQLLTVSH-ESEEV 106
           +A+D++QD ++K +  + +F++    + W+ RI+ N+ +   R  SKQ   V + E E  
Sbjct: 42  DAKDLVQDTYLKAYRFINSFEQGTNAKAWLFRILKNSFINEYRKKSKQPSKVDYQEVETY 101

Query: 107 ANLSADDVNLSGYSL---------DELLSMIQSLAPRYRMVFNLYAIEGYNHKEIGEMLG 157
            N  + D N++             DE+ + + SLA  +R V  L  +EG+ ++E+ ++L 
Sbjct: 102 YNSDSVDYNITSDLRVDAVKDMLGDEISNALNSLAVDFRTVIILCDLEGFTYEEMAKILD 161

Query: 158 ISEGTSKSQYSRARVILQNML 178
           I  GT +S+  RAR +L+  L
Sbjct: 162 IPIGTVRSRLHRARNLLKEKL 182