Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 180 a.a., RNA polymerase sigma factor from Agrobacterium fabrum C58

 Score = 57.4 bits (137), Expect = 1e-13
 Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 2/174 (1%)

Query: 11  EEKLIDGCIAGKRDMQRLLYDLYSKKMMAVCLRYAPTTFEAEDIMQDAFVKVFNNLQTFK 70
           + KL+    AG     R L +    ++MA+  R      EAED+ Q+ F++++ +  T++
Sbjct: 6   DAKLVADVAAGDIRAMRTLVEAKLPRIMALATRMLGDPVEAEDVAQETFLRIWKHAGTWR 65

Query: 71  RDCP-VEFWIRRIMINTALKHLRSKQLLTVSHESEEVANLSADDVNLSGYSLDELLSMIQ 129
           +     + WI R+ +N     LR ++ ++V+  S+     ++ +   +     E +    
Sbjct: 66  QGAARFDTWIHRVALNLCYDRLRKRREISVAQPSDLADARTSSENGGADIDEGEAVGRAL 125

Query: 130 SLAP-RYRMVFNLYAIEGYNHKEIGEMLGISEGTSKSQYSRARVILQNMLLRQE 182
           SL P R R    L   +  +++E  +++ +S    +S  SR R  LQ +L   E
Sbjct: 126 SLIPERQREAIILVYYQEMSNREAADIMHVSVDALESLLSRGRRALQKILNEDE 179