Pairwise Alignments

Query, 568 a.a., single-stranded-DNA-specific exonuclease RecJ from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 576 a.a., single-stranded-DNA-specific exonuclease RecJ from Dickeya dadantii 3937

 Score =  259 bits (663), Expect = 2e-73
 Identities = 178/561 (31%), Positives = 288/561 (51%), Gaps = 28/561 (4%)

Query: 25  ISSTLASILCQRGICTFDEAKHFFRPSLQDLHDPFLMKDMDQAVNRLNNALHSNEKILVY 84
           + + L  +  QRG+    E +     SL+ L D  L+  + QAV  L  AL  N +I++ 
Sbjct: 21  LPALLRRLYAQRGVRQMQELER----SLRGLLDYRLLGGITQAVEVLRQALADNRRIVIV 76

Query: 85  GDYDVDGTTSVALMYGFLRNYTSN-IDFYIPDRYKEGYGVSSQGIDWAAENGFTLIISLD 143
           GD+D DG TS AL    LR+     + + +P+R+++GYG+S + +  AA  G  LI+++D
Sbjct: 77  GDFDADGATSTALTVLALRSMGGREVQYLVPNRFEDGYGLSPEVVAQAAAKGAELIVTVD 136

Query: 144 CGIKSADKVAYASEKGIDFIICDHHLPDEDIPQAVAVLDPKRVDCPYPYKELSGCGVGFK 203
            GI S   V  A  +GI  ++ DHHLP E +P A A+++P   DC +P K L+G GV F 
Sbjct: 137 NGISSHAGVDDAHRRGIAVVVTDHHLPGETLPAAEAMINPNLSDCAFPSKALAGVGVAFY 196

Query: 204 LLQA---------FCIQNNIEQEEAYKLLDLLVVSIAADIVPITGENRILAYFGLQHLNG 254
           L+ A         +  +  + +    +LLDL+ +   AD+VP+   NRIL   GL  +  
Sbjct: 197 LMMALRANLRECGWFAERGLAEPNLAELLDLVALGTVADVVPLDANNRILISQGLSRIRA 256

Query: 255 PQPMRPGLDALKELADIRSEMDITSIVFGFA--PRINAAGRMGDAKNSVRMLLAQTKEEA 312
            +  RPG+ AL E+++ R    + +   GFA  PR+NAAGR+ D    V +LL     +A
Sbjct: 257 GK-CRPGIRALLEVSN-RDAAQLVASDLGFALGPRLNAAGRLDDMSVGVELLLCNDIVQA 314

Query: 313 FKMADIINESNKERRSKDTNITKEALQMIEQDEFLRTA--NSTVLFKETWHKGVIGIVAS 370
             +A  ++  N+ RR  +  +  EAL + EQ E  R        ++   WH+GV+GI+AS
Sbjct: 315 RMLASDLDALNQSRREIEAGMQVEALHLCEQLERSRDTLPLGLAMYHPQWHQGVVGILAS 374

Query: 371 RCIEHYYRPTIILTQS-NGKASGSARSVHGFNVHSAIE---SC-SDLLEQFGGHMYAAGL 425
           R  E ++RP I    + +G   GS RS+ G ++  A+E   +C   L+ +FGGH  AAGL
Sbjct: 375 RIKERFHRPVIAFAPAGDGILKGSGRSIAGLHLRDALERLDTCHPGLMLKFGGHAMAAGL 434

Query: 426 TLPVENVPAFIERFERVVTDTITEEQKIPQIEIDAPINLKQITRNFYNIIRQMEPFGPGN 485
           +L  +    F +RF  +V + +   Q    +  D  +   ++T     ++R+  P+G   
Sbjct: 435 SLVEDRFDEFRQRFADLVGEWLDASQLEGVVWSDGELASPELTLGTAEMLREAGPWGQAF 494

Query: 486 MRPVFVSECVYDTGSVRVVGDSHLKLRLTQ-DGFTSIDAIGFGLGDYYKAISKGIPFDVC 544
             P F     +     R+VG+ HLK+ +    G   +D I F +       S     ++ 
Sbjct: 495 PEPTFDGR--FRLLQQRLVGERHLKVMVEPLGGGPLLDGIAFNVDTLLWPDSSVREVELA 552

Query: 545 YTVEENIYRGVITLQLRIKDI 565
           Y ++ N +RG  ++QL I+ +
Sbjct: 553 YKLDVNEFRGKRSVQLLIEHL 573