Pairwise Alignments

Query, 310 a.a., mechanosensitive ion channel protein MscS from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 289 a.a., small-conductance mechanosensitive channel MscS from Serratia liquefaciens MT49

 Score =  125 bits (314), Expect = 1e-33
 Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 11/278 (3%)

Query: 1   MKDLNETVALLWSKLEDW----SDDIILMLPNLFVALVLLILTFYIAKVVRNTVDRVMGR 56
           MKDLN    +  +   +W     D +I    N+  A+V+ I+   IA+VV N + RVM  
Sbjct: 1   MKDLNVVDGI--NGAGNWLVQNQDLLIQYAVNIVAAIVIFIIGSIIARVVSNALSRVMKL 58

Query: 57  FSHSAALNNLVTTLVYLGVLVLGFFFVLNVLNLDKVVISLLAGVGIIGLALGFAFQDIAA 116
               A + + ++ +   G+L   F  VL  + +     S++A +G  GLA+G A Q   +
Sbjct: 59  RGIDATVADFLSAMARYGILAFTFIAVLGRVGVQTT--SVIAVLGAAGLAVGLALQGSLS 116

Query: 117 NFISGVIIAMQKPFGVGDMIETNDYFGIIERITLRTVDIRKVTGELVKLPNKMVFENPLT 176
           NF +GV++   +P   G+ ++     G ++++ + +  +R    + + +PN  +    + 
Sbjct: 117 NFAAGVLLVAFRPLRAGEYVDLGGVAGTVDQVQIFSTTLRTADNKTIVVPNGKIIAGNII 176

Query: 177 NFSVHGVRRVDVEVGVSYAEDLEQVQQVVIEALQDVKNRVKTRDVEVMYDAFGDSSINFK 236
           N+S    RRVD+ VGV+Y  D++ V++V+ + +   K  +  + V V  +    SS+NF 
Sbjct: 177 NYSREPNRRVDIVVGVAYNADIDVVKKVLGDVIAADKRIMHAKGVTVRLNEMAPSSLNFV 236

Query: 237 ARFWISYSRQVDYVGAKSDAIIRIKKAFDANDILIPFP 274
            R W   +   +Y     D +   K+A DAN+I IPFP
Sbjct: 237 TRSW---TTNAEYWNVYFDLMENFKRALDANNIGIPFP 271