Pairwise Alignments

Query, 310 a.a., mechanosensitive ion channel protein MscS from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 286 a.a., mechanosensitive channel protein, small conductance from Escherichia coli BL21

 Score =  130 bits (328), Expect = 3e-35
 Identities = 74/253 (29%), Positives = 132/253 (52%), Gaps = 5/253 (1%)

Query: 28  NLFVALVLLILTFYIAKVVRNTVDRVMGRFSHSAALNNLVTTLVYLGVLVLGFFFVLNVL 87
           N+  AL ++I+   IA+++ N V+R+M      A + + ++ LV  G++       L  +
Sbjct: 30  NIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRV 89

Query: 88  NLDKVVISLLAGVGIIGLALGFAFQDIAANFISGVIIAMQKPFGVGDMIETNDYFGIIER 147
            +     S++A +G  GLA+G A Q   +N  +GV++ M +PF  G+ ++     G +  
Sbjct: 90  GVQTA--SVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLS 147

Query: 148 ITLRTVDIRKVTGELVKLPNKMVFENPLTNFSVHGVRRVDVEVGVSYAEDLEQVQQVVIE 207
           + + +  +R   G+++ +PN  +    + NFS   VRR +  +GV+Y  D++QV+Q++  
Sbjct: 148 VQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTN 207

Query: 208 ALQDVKNRVKTRDVEVMYDAFGDSSINFKARFWISYSRQVDYVGAKSDAIIRIKKAFDAN 267
            +Q     +K R++ V  +  G SSINF  R W   S   D      D + RIK+ FDA 
Sbjct: 208 IIQSEDRILKDREMTVRLNELGASSINFVVRVW---SNSGDLQNVYWDVLERIKREFDAA 264

Query: 268 DILIPFPIRTLDF 280
            I  P+P   ++F
Sbjct: 265 GISFPYPQMDVNF 277