Pairwise Alignments

Query, 236 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 294 a.a., 16S rRNA 2'-O-ribose C1402 methyltransferase from Pseudomonas putida KT2440

 Score =  196 bits (499), Expect = 3e-55
 Identities = 109/230 (47%), Positives = 153/230 (66%), Gaps = 5/230 (2%)

Query: 9   LYLVPTPIGNLEDITLRAIRVLKEVDVILAEDTRTSGKLLQHLGIEKRMHSHHLHNEHKA 68
           LY+V TPIGNL+D++ RA++VL +V +I AEDTR S +LLQH GI+  + + H HNE   
Sbjct: 18  LYVVATPIGNLDDMSARALKVLADVALIAAEDTRHSIRLLQHFGIDTPLAACHEHNERDE 77

Query: 69  TAHLVDRLKAGEVMALISDAGTPGISDPGFYLVRECLKHDLKVECLPGATAFVPALVKSG 128
               + +L AGE +AL+SDAGTP ISDPG++LVR+     + V  +PGA A + AL  +G
Sbjct: 78  GGRFLSKLLAGENVALVSDAGTPLISDPGYHLVRQARAAGVSVVPVPGACALIAALSAAG 137

Query: 129 FSTDRFTFEGFLPLKK-GRQTRLQSLAEEERTMIFYESPHRLLKTLTQFKEYFGAEREAS 187
             +DRF FEGFLP K+ GR+ RL+ + EE RT+IFYE+PHR+L+ L   +  FG +R A 
Sbjct: 138 LPSDRFIFEGFLPAKQAGRRARLEQVREEPRTLIFYEAPHRILECLEDMEAVFGGDRPAL 197

Query: 188 VSREITKMFEETINGTLEELIEIF--NNKAIKGEFVLVVSG--APKGGKA 233
           ++RE+TK FE      L EL      ++   +GE V++V G  AP+G +A
Sbjct: 198 LARELTKTFETLKGLPLAELRAFVAGDSNQQRGECVVLVGGWSAPEGEQA 247