Pairwise Alignments

Query, 437 a.a., ribosome biogenesis GTPase Der from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 495 a.a., ribosome biogenesis GTPase Der from Dickeya dianthicola 67-19

 Score =  286 bits (731), Expect = 1e-81
 Identities = 160/465 (34%), Positives = 266/465 (57%), Gaps = 37/465 (7%)

Query: 5   IIAIVGRPNVGKSTLFNRLIGQRKAIMDNVSGVTRDRSYGHGDWTGKYYTVIDTGGYVHG 64
           ++A+VGRPNVGKSTLFNRL   R A++ +  G+TRDR YG  +  G  + +IDTGG + G
Sbjct: 4   VVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEMEGNEFIIIDTGG-IDG 62

Query: 65  SEDIFESEINRQVELAMNEADVILFMVDVDAGLTGLDEEFANVLRRTDKPVYVVANKADT 124
           +ED  E+ +  Q  LA+ EAD++LF+VD   GL   D   A  LR  +K  ++VANK D 
Sbjct: 63  NEDGVETRMAEQSLLAIEEADIVLFLVDARDGLMPADHAIAQHLRMREKDTFLVANKIDG 122

Query: 125 NARMHQMGEFYALGVGIDIYPISSQSGSGTGELLDEVVKHFK------------------ 166
                 + +FY+LG+G +++PI++  G G   LL++V+  F                   
Sbjct: 123 IDIDSGIADFYSLGLG-EVHPIAASHGRGVTSLLEKVLLPFAAEPAQETRELTEEEANAA 181

Query: 167 ---------DEGVEDPDAG-----IP-KIAVLGRPNVGKSSFVNLLLGEERNIVTDRAGT 211
                    D+ ++  D G     +P K+A++GRPNVGKS+  N +LGEER +V D  GT
Sbjct: 182 YWAEQLGEGDDAIDGEDTGPNLEGLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGT 241

Query: 212 TRDAIHARYNAFGKEFIIVDTAGLRRKSKVSEDIEFYSVLRSVRALEDADVCIVILDATR 271
           TRD+I+      G++++++DTAG+R++ K+++ +E +SV+++++A+EDA+V ++++DA  
Sbjct: 242 TRDSIYIPMERDGRDYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDARE 301

Query: 272 GIEAQDVNIIALAEKNRKGIVILVNKWDLVEKDTHTTKQFEDEIYNRIAPISYVPIIFTS 331
           GI  QD++++     + + +VI+VNKWD + ++     Q ++ +  R+  I +  I F S
Sbjct: 302 GISDQDLSLLGFILNSGRSLVIVVNKWDGLTQE--VKDQVKETLDLRLGFIDFARIHFIS 359

Query: 332 VVTKQRIHKAIEVAMEVYDNKTKKIPTSKLNDAMLPEIERYPPPAIKGKFVKIKYITQLP 391
            +    +    E   E YD  T+++ T+ L   M    + + PP ++G+ VK+KY     
Sbjct: 360 ALHGSGVGNLFESVTEAYDCSTRRVGTAMLTRIMQMAADDHQPPLVRGRRVKLKYAHAGG 419

Query: 392 THNPTFAFFCNLPQYVKESYVRYLENRMREHFGFTGVPIKLVFRK 436
            + P      N  + + +SY RYL N  R      G PI++ F++
Sbjct: 420 YNPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLEVMGTPIRIQFKE 464



 Score = 75.1 bits (183), Expect = 5e-18
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 3/129 (2%)

Query: 177 IPKIAVLGRPNVGKSSFVNLLLGEERNIVTDRAGTTRDAIHARYNAFGKEFIIVDTAGLR 236
           IP +A++GRPNVGKS+  N L      +V D  G TRD  + R    G EFII+DT G+ 
Sbjct: 2   IPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEMEGNEFIIIDTGGID 61

Query: 237 RKSKVSEDIEFYSVLRSVRALEDADVCIVILDATRGIEAQDVNIIALAEKNRKGIVILVN 296
                 + +E     +S+ A+E+AD+ + ++DA  G+   D  I        K   ++ N
Sbjct: 62  GN---EDGVETRMAEQSLLAIEEADIVLFLVDARDGLMPADHAIAQHLRMREKDTFLVAN 118

Query: 297 KWDLVEKDT 305
           K D ++ D+
Sbjct: 119 KIDGIDIDS 127