Pairwise Alignments

Query, 437 a.a., ribosome biogenesis GTPase Der from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 539 a.a., ribosome biogenesis GTPase Der from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  305 bits (782), Expect = 2e-87
 Identities = 163/430 (37%), Positives = 257/430 (59%), Gaps = 5/430 (1%)

Query: 6   IAIVGRPNVGKSTLFNRLIGQRKAIMDNVSGVTRDRSYGHGDWTGKYYTVIDTGGYVHGS 65
           +AIVGRPNVGKSTLFNRL+G+R A++D+  GVTRDR Y  G+      T+IDT GY   +
Sbjct: 5   VAIVGRPNVGKSTLFNRLVGKRLALVDDRPGVTRDRRYADGNIGDMDLTLIDTAGYEDVT 64

Query: 66  EDIFESEINRQVELAMNEADVILFMVDVDAGLTGLDEEFANVLRRTDKPVYVVANKADTN 125
           +D  E+ +  Q E A+++A++++FM+D   G+T LD  FA  LRR  KPV ++ANK+++ 
Sbjct: 65  DDSLEARMREQTEAALDDAELVMFMMDAREGVTSLDRIFAERLRRVHKPVILLANKSESR 124

Query: 126 ARMHQMGEFYALGVGIDIYPISSQSGSGTGELLDEVVKHFKD---EGVEDPDAGIPKIAV 182
                +GE +ALG G  +  IS++ G G  +L   +V   +D   E +++PD  I +IAV
Sbjct: 125 ESGGGVGEAHALGFGEPV-AISAEHGEGMADLYAAIVAASQDIFVEEIDEPDKPI-RIAV 182

Query: 183 LGRPNVGKSSFVNLLLGEERNIVTDRAGTTRDAIHARYNAFGKEFIIVDTAGLRRKSKVS 242
           +GRPN GKS+ +N L+G++R +    AG TRD+I   +   GK   +VDTAG+RRK++V 
Sbjct: 183 IGRPNAGKSTLINRLIGDDRLLTGPEAGITRDSISVDWQFEGKNIRLVDTAGMRRKARVQ 242

Query: 243 EDIEFYSVLRSVRALEDADVCIVILDATRGIEAQDVNIIALAEKNRKGIVILVNKWDLVE 302
           E +E  SV  ++RA+  A+V I+++D     + QD+ +  L E+  + +V + +KWDL +
Sbjct: 243 EKLEKLSVADTIRAITFAEVVILMMDKDDAFDTQDLQLADLVEREGRALVYVASKWDLED 302

Query: 303 KDTHTTKQFEDEIYNRIAPISYVPIIFTSVVTKQRIHKAIEVAMEVYDNKTKKIPTSKLN 362
           +      + +    +++  +   P +  S  + + + + +   ++ YD  + K+ T  LN
Sbjct: 303 EPQSRMAKLKGMAEDKLPQLKGSPFVALSSHSGRGVERLMPAVLQAYDTWSVKVKTKDLN 362

Query: 363 DAMLPEIERYPPPAIKGKFVKIKYITQLPTHNPTFAFFCNLPQYVKESYVRYLENRMREH 422
             +    +R+PPPA+ GK +K KYI Q     PTF    N  + + E Y RYL N +RE 
Sbjct: 363 TWLSMATQRHPPPAVDGKRIKPKYIAQTKARPPTFVLMANRAESMPEHYKRYLVNSIRES 422

Query: 423 FGFTGVPIKL 432
           F   G PI+L
Sbjct: 423 FDLPGTPIRL 432



 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 179 KIAVLGRPNVGKSSFVNLLLGEERNIVTDRAGTTRDAIHARYNAFGKEFIIVDTAGLRRK 238
           K+A++GRPNVGKS+  N L+G+   +V DR G TRD  +A  N    +  ++DTAG   +
Sbjct: 4   KVAIVGRPNVGKSTLFNRLVGKRLALVDDRPGVTRDRRYADGNIGDMDLTLIDTAGY--E 61

Query: 239 SKVSEDIEFYSVLRSVRALEDADVCIVILDATRGIEAQDVNIIALAEKNRKGIVILVNK 297
               + +E     ++  AL+DA++ + ++DA  G+ + D        +  K +++L NK
Sbjct: 62  DVTDDSLEARMREQTEAALDDAELVMFMMDAREGVTSLDRIFAERLRRVHKPVILLANK 120