Pairwise Alignments

Query, 935 a.a., uvrA paralog in Bacteroidetes (from data) from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 940 a.a., excinuclease ABC subunit A (NCBI) from Escherichia coli BW25113

 Score =  764 bits (1974), Expect = 0.0
 Identities = 421/949 (44%), Positives = 608/949 (64%), Gaps = 43/949 (4%)

Query: 18  IIIKGARVHNLKNLSVALPRNKFIVITGLSGSGKSSLAFDTLYAEGQRMYVESLSSYARQ 77
           I ++GAR HNLKN+++ +PR+K IV+TGLSGSGKSSLAFDTLYAEGQR YVESLS+YARQ
Sbjct: 4   IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63

Query: 78  FLGRMDKPDVDYIKGISPAIAIEQKVSIKNNRSTVGTSTEIYDYLKLLYARIGKTYSPVS 137
           FL  M+KPDVD+I+G+SPAI+IEQK +  N RSTVGT TEI+DYL+LL+AR+G+   P  
Sbjct: 64  FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123

Query: 138 GEVVKKDSVTDVVNFIFSLEDEARVMILAPLHQHQERTLAKELDLLLQKGYSRIYANEQV 197
              +   +V+ +V+ + S  +  R+M+LAP+ + ++    K L+ L  +GY R   + +V
Sbjct: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183

Query: 198 YFIEELLEEKKPKLGKE--VFILVDRAVIYKSDEDLAFRISDSVQTAFFEGHGECRVLYG 255
               +L +  K +L K+  + ++VDR   +K  +DL  R+++S +TA     G   V   
Sbjct: 184 C---DLSDPPKLELQKKHTIEVVVDR---FKVRDDLTQRLAESFETALELSGGTAVVADM 237

Query: 256 N---GEERVFSDRFE--LDGMVFEEPSVNFFSFNNPYGACQTCEGFGSVLGIDPDLVIPD 310
           +    EE +FS  F   + G    E     FSFNNP GAC TC+G G     DPD VI +
Sbjct: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297

Query: 311 KSLTVYEGAIAPWRTDKMNEWLQPLLKN-GIRFDFPIHRPYNELTEAEQELLWTGN---- 365
             L++  GAI  W  D+ N +   +LK+    + F +  P+  L+    +++  G+    
Sbjct: 298 PELSLAGGAIRGW--DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355

Query: 366 ---KY-------------FSGLNAFFKEIQSQTHKIQYRVMLSRYRGRTTCPECRGSRLR 409
              KY             F G+    +    +T     R  L+++     C  C G+RLR
Sbjct: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415

Query: 410 KDASYVKVGGKSITDLVLMPITQVLPFFQNLELTEHEHNVAERLVTEVSNRLGYLQRVGL 469
           ++A +V V    +  +  M I   + FF NL+L      +AE+++ E+ +RL +L  VGL
Sbjct: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475

Query: 470 GYLTLNRLSNTLSGGESQRINLATSLGSALVGSMYILDEPSIGLHPKDSEQLIGVLRSLQ 529
            YLTL+R + TLSGGE+QRI LA+ +G+ LVG MY+LDEPSIGLH +D+E+L+G L  L+
Sbjct: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535

Query: 530 QIGNTVIVVEHEEEMMKAADQLIDIGPEAGSGGGNLMFQGSFEEMTQRADTYTSKYLSGK 589
            +GNTVIVVEH+E+ ++AAD +IDIGP AG  GG ++ +G  E +    ++ T +Y+SGK
Sbjct: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595

Query: 590 MEVPVPAQR--RKWRNAIEIIGARENNLKNLSVKVPLGVMTVVTGVSGSGKSTLIKKILA 647
            ++ VP +R        +++ GAR NNLK++++ +P+G+ T +TGVSGSGKSTLI   L 
Sbjct: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655

Query: 648 P-AMQKLHGSTAEATGKFDKLAGDYNKIEHVEFVDQNPIGKSSRSNPVTYVKAYDAIRTL 706
           P A ++L+G+T      +  + G     + V  +DQ+PIG++ RSNP TY   +  +R L
Sbjct: 656 PIAQRQLNGATIAEPAPYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714

Query: 707 YADQPLAKSRGFKPSHFSFNIEGGRCEVCQGEGQVKIEMQFMADIYLTCESCHGQRFKQD 766
           +A  P +++RG+ P  FSFN+ GGRCE CQG+G +K+EM F+ DIY+ C+ C G+R+ ++
Sbjct: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774

Query: 767 VLDIKYKDKSISDVLEMTIADSIDFFADQPKIIEKLKPLNDVGLGYIRLGQSSNTLSGGE 826
            L+IKYK K+I +VL+MTI ++ +FF   P +  KL+ L DVGL YIRLGQS+ TLSGGE
Sbjct: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834

Query: 827 AQRVKLASFLTKGAQPHQENILFIFDEPSTGLHFHDISKLLTSINALIENGNTVVIIEHN 886
           AQRVKLA  L+K         L+I DEP+TGLHF DI +LL  ++ L + GNT+V+IEHN
Sbjct: 835 AQRVKLARELSKRG---TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891

Query: 887 MDIVKCADWIIDLGPEGGTNGGHLLFEGTPEEMAKLEDNDTARFLKEKL 935
           +D++K ADWI+DLGPEGG+ GG +L  GTPE +A+ E + TARFLK  L
Sbjct: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940