Pairwise Alignments

Query, 514 a.a., PAS domain-containing sensor histidine kinase from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 593 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  319 bits (817), Expect = 2e-91
 Identities = 175/493 (35%), Positives = 287/493 (58%), Gaps = 20/493 (4%)

Query: 16  SRLKAIIETAVDGIITIDTEGRMESANPAAARIFGYEPEEMIGRNVHMLMPEPDHGLHDG 75
           S+ +A++ETA D ++ +++EG++   N      FGY  EE+IG  + +L+P+     H  
Sbjct: 118 SKAQALVETAPDAMVIVNSEGQIVLINAQTENQFGYNKEELIGSELEILIPDKYISKHKQ 177

Query: 76  YIKRYMQTGEGQIIGKGREVLGKKKDGSLFPFFLSIAEVKLQDKIIFTGIVHDISDLKKT 135
             K Y +  + + +G+G E+ GK+KDGS+FP  +S++ +K +D +  +  + +I+D KK 
Sbjct: 178 NRKSYAKQPKPRSMGQGMELFGKRKDGSVFPVEISLSPLKTEDGLFVSAAIRNITDRKK- 236

Query: 136 EEALRESESKINSIIQTAVDGIITIDRRGVMEMVNPAAARLFEYEEHELIGRKINMLMPE 195
                 +E+K   ++++A D II  D+ G +++ N     +F Y + ELIG KI ML+P 
Sbjct: 237 ------AENKFKGLLESAPDAIILADKDGNIQLANEQVVNIFGYSKSELIGNKIEMLVPM 290

Query: 196 PDQSLHDNYMHHYHETGERRIIGIGREVSGLKKSGTIFPLYLSISEVQLTDRKVYTGFIH 255
                H N+   +  T E R +  G E+SG++KSG  FP+ +S+S ++  D  +    I 
Sbjct: 291 RYHHRHTNHRDEFFHTAETRPMASGLELSGVRKSGEEFPVEISLSPLETEDGALAIAVIR 350

Query: 256 DITQQKLSEERLRRYAAELERSNRELQDFAYVSSHDLQEPLRKIQAFGDRLKTKEYEKLS 315
           D +++   ++ ++ +  +L+  N+EL+ FAYV+SHDLQEPL+ + +F + L     E   
Sbjct: 351 DTSEKAAVKKEMQDFNKKLQVKNKELEQFAYVASHDLQEPLQTVMSFTEFLSENYGEHFD 410

Query: 316 DQGKDYVDRMLNAASRMQNLINDLLDFSRVTSKSKAFVQVSLDSVLTDVLSDLEITIEKT 375
           + GK  +  ++ A  RM+ LI  LLD+SR+  + K  V V  +S+++D+  DL   I+ T
Sbjct: 411 ETGKKSMQYIMEATGRMRQLIKGLLDYSRIGRERKP-VMVDCNSLISDIKVDLSSQIKAT 469

Query: 376 GAQIQRAPLPHIEADPTQLRQLFQNLVSNAIKFRKENEQPQINIFARELQGKARMTSTPG 435
            A I    LPHI+ + T+LR LFQNL++N IKF +E   P+I I             T  
Sbjct: 470 NASIHADNLPHIKGNYTELRLLFQNLITNGIKFHQEGVPPKIQIGV-----------TKK 518

Query: 436 DEMVEIHVQDNGIGFDEKYLDRIFNIFQRLEGQK-YEGSGIGLAICRKIAVRHGGDITAH 494
            +     ++DNGIG + K+ +RIF IFQRL  +  Y+G+GIGLA C+KI   HGG I  H
Sbjct: 519 ADHWLFCIKDNGIGIENKFKERIFIIFQRLHTRNTYDGTGIGLAHCQKIVELHGGKIWVH 578

Query: 495 SQAGIGTTFIVTL 507
           S+ G G++F+ T+
Sbjct: 579 SELGKGSSFLFTV 591



 Score = 82.0 bits (201), Expect = 5e-20
 Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 26/209 (12%)

Query: 10  RNVDD----QSRLKAIIETAVDGIITIDTEGRMESANPAAARIFGYEPEEMIGRNVHMLM 65
           RN+ D    +++ K ++E+A D II  D +G ++ AN     IFGY   E+IG  + ML+
Sbjct: 229 RNITDRKKAENKFKGLLESAPDAIILADKDGNIQLANEQVVNIFGYSKSELIGNKIEMLV 288

Query: 66  PEPDHGLHDGYIKRYMQTGEGQIIGKGREVLGKKKDGSLFPFFLSIAEVKLQDKIIFTGI 125
           P   H  H  +   +  T E + +  G E+ G +K G  FP  +S++ ++ +D  +   +
Sbjct: 289 PMRYHHRHTNHRDEFFHTAETRPMASGLELSGVRKSGEEFPVEISLSPLETEDGALAIAV 348

Query: 126 VHDISDLKKTEEALRESESKINSIIQTAVDGIITIDRRGVMEMVNPAAARLFEYEEHELI 185
           + D S+    ++ +++   K+                      V       F Y     +
Sbjct: 349 IRDTSEKAAVKKEMQDFNKKL---------------------QVKNKELEQFAYVASHDL 387

Query: 186 GRKINMLMPEPDQSLHDNYMHHYHETGER 214
              +  +M    + L +NY  H+ ETG++
Sbjct: 388 QEPLQTVM-SFTEFLSENYGEHFDETGKK 415



 Score = 33.1 bits (74), Expect = 3e-05
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 147 NSIIQTAVDGIITIDRRGVMEMVNPAAARLFEYEEHELIGRKINMLMPE 195
           + +   A D I+  D RG +   N A+ +LFEY    L+G +   L+ E
Sbjct: 3   SQVFSNARDAILAFDLRGNVVYSNAASYKLFEYNRSSLLGMEYGALVHE 51