Pairwise Alignments

Query, 522 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 522 a.a., Predicted RNA-binding protein homologous to eukaryotic snRNP from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  417 bits (1072), Expect = e-121
 Identities = 218/522 (41%), Positives = 336/522 (64%), Gaps = 7/522 (1%)

Query: 1   MHLNYYFLRQLTQALRAKVLGMQAITAFSQNKDELILGFARQGEELYIRAQLGAQFTSLS 60
           MHLNY+FL+ L   +   + G++    FSQ++DEL+LGFA      YIRA L    T + 
Sbjct: 1   MHLNYHFLKYLCPEVERVLNGLELSICFSQHRDELVLGFANNERSHYIRANLSPSNTCIC 60

Query: 61  FPAEFRRARANSVELMQAMQGQTVEDVVQHRNERSFYFQLSGGYLLLFKLFGNRSNIILY 120
           FP +++R++ NSV+L  A+ G  V  V     ER+F      G  LLFKL GNRSNI+L+
Sbjct: 61  FPKDYKRSKKNSVDLFSALLGDQVTSVRVLSFERAFRIDFKTGRTLLFKLHGNRSNILLF 120

Query: 121 QGQE---AVELFQHKFAADAALNPLQMDRPLQQNAEAFANANGNLRKVYPTFGDVPALYL 177
              +   A+ LF+++   D  +    +++ L  + E F   NG      PT G +P  +L
Sbjct: 121 DQTKQASAITLFRNELKEDHNILLGDLEKNLDLSHEEFIRQNGKAATFLPTLGKIPREWL 180

Query: 178 EERGYQEASLEEKWELVQDTLDVLQAPEAYYIIRLNGKLRLSLLPVGEVLHTYSGPMEAA 237
           +  GY EA L +KW+L+Q+ +D+L AP  + I++   + + +LLP    ++T + P+EA 
Sbjct: 181 KSHGYIEADLPQKWQLMQEMIDMLNAP-LFSIVKKEHEYQFTLLPANSPVYTSANPLEAC 239

Query: 238 DHYTRHYLSETGFEQQYGQASQVLERKRQVTQTVMEQSEQKLQELRHDRSYSQTADVIMA 297
           + Y ++ +    FE++     + LE +++ T   + ++ +KL+EL+     SQ AD+IMA
Sbjct: 240 NEYFQYTVVHQAFEKEKNHLVKNLEDQKKKTWAYLNKTAKKLEELKSSAPPSQVADIIMA 299

Query: 298 NLTNIPPRATEVELYDFYTDQNRTYKLKQNETPQKFAERLYRKAKNQHVEVKQLEEKVER 357
           NL  IP  A E  L+DFY ++  T  LK+  TPQK AE LYRK+KN+ +EV+QLE+ +  
Sbjct: 300 NLHQIPHGAEEARLFDFYQNKEVTIPLKKGVTPQKHAENLYRKSKNRKIEVQQLEKNISE 359

Query: 358 KLEELIVLEDALQALREVENYKQLKAYLREYNHLLGSKQQEQQ-QVPFRVFESEGFKILV 416
           K E  + LE  L+ L  ++N+K L+ + +  +H L SK +E Q  +PF+ F+ +GF+ILV
Sbjct: 360 KEEYYLTLESLLEELASIKNFKTLRDFSK--HHQLSSKTKESQTNLPFKRFDIDGFEILV 417

Query: 417 GKSAQNNDQLTQRHTYKEDIWLHAKDVSGSHVVIKHQAGKTIPVTVLEKAAQLAAYYSKR 476
           GKSA+ NDQ+ + +++K+D+WLHAKDV+GSHV+IK+++G+TIP   LE+AA+LAA+YSK 
Sbjct: 418 GKSAKANDQMLRYYSWKDDMWLHAKDVAGSHVIIKYRSGQTIPQNTLERAAELAAFYSKS 477

Query: 477 KADSLCPVIYTPKKWVRKPKGSPAGSVVVEREKVLLVKPENP 518
           K ++L  VIYTP K+VRK KGSP+G+V+V++EKVL+V P+ P
Sbjct: 478 KNETLAAVIYTPCKYVRKVKGSPSGAVMVDQEKVLMVSPKGP 519