Pairwise Alignments

Query, 1740 a.a., PAS domain S-box protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 956 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  290 bits (743), Expect = 4e-82
 Identities = 195/643 (30%), Positives = 327/643 (50%), Gaps = 21/643 (3%)

Query: 971  INTQNARLNAIFESGTHHMWSLNR---HYELTSFNRNFAQAFESRNSRQLEQFTPINDDS 1027
            +  Q+ ++N +FE  T  +   N    +++ +    N ++   +      E+F   N+ S
Sbjct: 309  LEKQSQQINRLFEQQTMLLQETNGFVYYHDASGKVSNVSENVTNVLGFTKEEFLE-NNKS 367

Query: 1028 MVHESSYAFWEDKYKQAFAGQPQHFEIQLKYPESWREV-----YLNPIYLEDGSFEEVSG 1082
             V E      ++K K+A   +  +   ++ + +    +     +    Y ++G F    G
Sbjct: 368  QVVEKDLQKLQEKAKKALDEKWDYLSFEVSFLKKDGAIIRTKNFERLFYDQEGKFVSSVG 427

Query: 1083 IALDITDKKKSQLALAENEEKFRRIFESFQDVYYRSSLEDGTLELISPSITQLLGYEEHE 1142
            I  DIT+K  ++  L ++E + R +  S  D+ +    +   L+        L+   E  
Sbjct: 428  ICTDITEKYLAERELIKSENRLRSVLNSLPDIIFIYDNQGVYLDYYVQESDMLISPPELS 487

Query: 1143 VLGQSTLLFYTNPEDQTRIRQLVAAEHTVRDIEVEMVCKDGTPKTIVLDAKLVYNEHGVP 1202
             LG+        P  +     L+ A  T + ++ E +  D       L+ +    +    
Sbjct: 488  -LGKHIRDIIPPPYGEKMESALLRAAKTGK-VQTEQMTLDLPSGKKFLEIRFFKLDEE-- 543

Query: 1203 VAMEGVARDVSELKRTQIALLTAKEEAENLLKVKTQFLANMSHELRTPMNGIIGMIDLLS 1262
              M  V RDV+E K  +  L  AKE AE   + K++FLA+MSHE+RTPMNG++GMI LL 
Sbjct: 544  -RMISVGRDVTEQKLWEKGLKEAKEVAEGANRAKSEFLASMSHEIRTPMNGLLGMIGLLE 602

Query: 1263 QINTDPEQSEYIDTLRKSSDALLAILNDILDLSKIQAGKLVLHESGVDLHETLDKIHSLF 1322
                D EQ   +  ++ S ++LL I+ DILD SKI+ GKL L  S     E L+K+ ++F
Sbjct: 603  HTKMDDEQQSIVKVIKDSGESLLVIIKDILDYSKIEEGKLELELSSSKFREELNKVINIF 662

Query: 1323 VNRAQQKDLTFTYAIDPNVPRHVVTDETRLLQVLSNLTSNAIKFT-NAGEVSIHVGAEQL 1381
                  K+L+    I P +P+ ++ D  +L Q+L N+  NA+KFT   G+VSI V  E +
Sbjct: 663  SGMVVGKELSLNLDIAPTIPQWLILDNEKLSQILFNIIGNAVKFTPKGGDVSIKVSGEPI 722

Query: 1382 DRKHFRLHVRVKDSGIGISPEGQELLFNDFTQLDNSSTKTFGGTGLGLAISRQLTHLLGG 1441
              K+F L+  VKD+G+GI     + L N FTQ    + +   G+GLGLAI+ +L  L+GG
Sbjct: 723  LDKNFMLYFNVKDTGVGIPKSKIDQLINPFTQTGRGTAEEKSGSGLGLAIANKLIELMGG 782

Query: 1442 DIGVESIPGDGSVFWFNIKVRLASTLEV-----EQQQLRQQQQLQEVESLTYTPYVLLVD 1496
             + +ES  G GS F F +  R++ + E       ++  +++ +L  + S  +   +LL +
Sbjct: 783  SLQIESEVGKGSEFSFTVFARISDSEEKVGKDDYEKYAKEEYKLSHI-SDKFPKEILLAE 841

Query: 1497 DNQINQKVAQKQLERLGCITEIASNGYEAIERATTKKYNIIFMDIQMPEMDGVTATKHIK 1556
            DN IN K  +  +++LG   +  S G EA++    K+Y++IFMD QMP MDG+ A++ IK
Sbjct: 842  DNDINLKFMKLLMKQLGYSVDTVSTGEEAVKAVQKKRYDMIFMDYQMPVMDGLEASREIK 901

Query: 1557 EQLGSACPPIVAMTAYSMKDDAAKFMGQGMDDYVSKPVKSSDL 1599
            +        I+ ++A   K+D  +    GMDDY++KP+K  D+
Sbjct: 902  KMKEGKYIRIIGLSANVFKEDIERAYEAGMDDYLTKPIKIQDV 944



 Score = 44.3 bits (103), Expect = 7e-08
 Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 38/266 (14%)

Query: 512 LFDTEITVNRLILDGEYYVQAFKRDITQRKLAQQARRREEVLRESMDQFRNFLDKVNLIY 571
           LF   I V  L++  ++ +   +R I   K +QQ  R  E       Q    L + N   
Sbjct: 284 LFTLLILVIYLLI--KHGISIDERHIALEKQSQQINRLFE-------QQTMLLQETNGFV 334

Query: 572 YSLDKKGNIAFANNYFMKYVEYTEEEMIGQNFYELLVPKHDRAQRLQD-FHKAMETKHLS 630
           Y  D  G ++  +      + +T+EE +  N  +++       Q+LQ+   KA++ K   
Sbjct: 335 YYHDASGKVSNVSENVTNVLGFTKEEFLENNKSQVV---EKDLQKLQEKAKKALDEKWDY 391

Query: 631 SYYERDVVTKSGQL-KTIRWNCMFEYNQEGEVTGLTSVGKDMTDKRIAMEALKDNKIRLQ 689
             +E   + K G + +T  +  +F Y+QEG+      +  D+T+K +A   L  ++ RL+
Sbjct: 392 LSFEVSFLKKDGAIIRTKNFERLF-YDQEGKFVSSVGICTDITEKYLAERELIKSENRLR 450

Query: 690 DLFDNAHDLIQNISVDNKFIFVNKAWKDRLGYTDQDIESLT----------LNDIVHPYY 739
            + ++  D+I     DN+ ++        L Y  Q+ + L           + DI+ P Y
Sbjct: 451 SVLNSLPDII--FIYDNQGVY--------LDYYVQESDMLISPPELSLGKHIRDIIPPPY 500

Query: 740 KAKLIYQLRNLYKGENVNKIETVFLT 765
             K+      L +     K++T  +T
Sbjct: 501 GEKM---ESALLRAAKTGKVQTEQMT 523



 Score = 33.5 bits (75), Expect = 1e-04
 Identities = 65/288 (22%), Positives = 127/288 (44%), Gaps = 37/288 (12%)

Query: 408 YIARHQLQKQLIRTEDKYKMLFESSYDAILLFKD--GIVVECNDKAIEFFRCTREDLIGK 465
           +IA  +  +Q+ R  ++  ML + + +  + + D  G V   ++        T+E+ +  
Sbjct: 306 HIALEKQSQQINRLFEQQTMLLQET-NGFVYYHDASGKVSNVSENVTNVLGFTKEEFLEN 364

Query: 466 SPKDYSPEFQPDGQNSVEKTERLMRDLLTTGRSVTFEWKNRRKDGTLFDTEITVNRLILD 525
           +    S   + D Q   EK ++ + +       ++FE    +KDG +  T+    RL  D
Sbjct: 365 NK---SQVVEKDLQKLQEKAKKALDEKWDY---LSFEVSFLKKDGAIIRTK-NFERLFYD 417

Query: 526 GE-YYVQAFK--RDITQRKLAQQARRREEVLRESMDQFRNFLDKVNLIYYSLDKKGNIAF 582
            E  +V +     DIT++ LA      E  L +S ++ R+ L+ +  I +  D +G    
Sbjct: 418 QEGKFVSSVGICTDITEKYLA------ERELIKSENRLRSVLNSLPDIIFIYDNQG---- 467

Query: 583 ANNYFMKYVEYTEEEMIGQNFYELLVPKHDRAQRLQDFHKAMETKHLSSYYERDVVTKSG 642
               ++ Y  Y +E  +  +  EL + KH R      + + ME+  L +     V T+  
Sbjct: 468 ---VYLDY--YVQESDMLISPPELSLGKHIRDIIPPPYGEKMESALLRAAKTGKVQTEQM 522

Query: 643 QL-----KTIRWNCMFEYNQEGEVTGLTSVGKDMTDKRIAMEALKDNK 685
            L     K       F+ ++E  +    SVG+D+T++++  + LK+ K
Sbjct: 523 TLDLPSGKKFLEIRFFKLDEERMI----SVGRDVTEQKLWEKGLKEAK 566