Pairwise Alignments

Query, 517 a.a., PAS sensor protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 736 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

 Score =  286 bits (733), Expect = 1e-81
 Identities = 175/511 (34%), Positives = 264/511 (51%), Gaps = 33/511 (6%)

Query: 14  HNYDSEFCGSIPLHLVNLIQPHGVLLVLDKEELRIKQVSENVEQHLAI-----AVDELLE 68
           H    + CG+ P+H+   IQ HG LLVL   E  + Q S+N+  ++ +     AV     
Sbjct: 4   HTPKLDSCGAEPIHIPGAIQEHGALLVLSAREFSVVQASDNLANYIGVDLPIGAVATEAN 63

Query: 69  QPFSSYLPDLQYQDLLYKINSGNSQEKIPFSLTLQLQGREQDFIALVHPEQEHVLVELEE 128
            PF S L            ++  S E+  F    +    E+      H     V++E+E+
Sbjct: 64  LPFISVL------------SAWYSGEESNF----RYAWAEKKLDVSAHRSGTLVILEVEK 107

Query: 129 NAA--SSDKSFIGIYQHIKYITTLLKQASTTSATAQLAADELKKFTGFDRVLVYQFDPQW 186
                S++K    +    KY+ +          TAQL +      +G DR L+Y F   W
Sbjct: 108 AGVGESAEKLMGELTSLAKYLNSAPSLEDALFRTAQLVSS----ISGHDRTLIYDFGLDW 163

Query: 187 NGIVVAQAKEDDMDDYMDLRFPASDVPKQARDLYFKNPYRLIPTRDYKPQRLIPIVNPIT 246
           +G VVA+A    +  Y+ LRFPA D+P QAR LY  N  R+IP  DYKP  + P VN  T
Sbjct: 164 SGHVVAEAGSGALPSYLGLRFPAGDIPPQARQLYTINRLRMIPDVDYKPVPIRPEVNAET 223

Query: 247 QRFTDLSDCNLRSVASVHLEYLANMQIVASMSLPLIVDNKLWGLISCHHKTAKNPSYEQR 306
               D+S   LRSV+ VHLEY+ NM   ASMS+ ++V+  LWGLI+CHH T  + S   R
Sbjct: 224 GAVLDMSFSQLRSVSPVHLEYMRNMGTAASMSVSIVVNGALWGLIACHHATPHSVSLAVR 283

Query: 307 SGMELLAGIVSAQLAGKERESAILLRAQLRSIHAHLLEQLYNSQNFVEGLLSGSVTIQDL 366
              +  A ++S ++A ++       R +L  I A LL+ +  ++ +V+GLL G    +DL
Sbjct: 284 EACDFAAQLLSMRIAMEQSSQDASRRVELGHIQARLLKGMAAAEKWVDGLLGGEGEREDL 343

Query: 367 L---SLTGAAVLYEGNVWTSGDTPGEQELRELVSWLRRNRSEKIIATATLPQEYAHSRIY 423
           L      GAA++   +    G+TP  +++ EL+ WL       + AT  L   Y  +  Y
Sbjct: 344 LKQVGADGAALVLGDDYELVGNTPSREQVEELILWLGEREIADVFATDNLAGNYPTAAAY 403

Query: 424 KDVASGLVALPINPEQGEYILGFRPEVLQTVNWGGDPKKAIQMEDDGKTYHPRNSFATYK 483
             VASG++A+ ++   G +++ FRPEV++TV WGGDP K +Q   +    HPR SF  +K
Sbjct: 404 ASVASGIIAMRVSELHGSWLIWFRPEVIKTVRWGGDPHKTVQ---ESGRIHPRKSFEIWK 460

Query: 484 ETVKYTSLPWQEEEIEAAAVLRSAVLEKIIK 514
           E ++ TS PW E E+ AA  LR A++  +++
Sbjct: 461 EQLRNTSFPWSEPELAAARELRGAIIGIVLR 491