Pairwise Alignments

Query, 710 a.a., DNA helicase RecQ from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 602 a.a., ATP-dependent DNA helicase from Agrobacterium fabrum C58

 Score =  456 bits (1174), Expect = e-132
 Identities = 252/594 (42%), Positives = 348/594 (58%), Gaps = 15/594 (2%)

Query: 11  LKLYFGYEQFRPMQEQIIEGVLQGQDVVVLMPTGGGKSVCYQVPAVVQPGMCVVVSPLIA 70
           LK  +GY+ FR  Q +II+ V+ G +  VLMPTGGGKS+CYQ+PA+ + GM +VVSPLIA
Sbjct: 9   LKAVYGYDAFRGRQGEIIQHVVAGNNAFVLMPTGGGKSLCYQIPALAREGMGLVVSPLIA 68

Query: 71  LMKDQVEALLANGIPAAYINSSQSAEQQYQIENQCLDGKLKLLYVSPEKLLSSGFMAFLR 130
           LM DQV AL   G+ A  +NS  S E++  +      G + +LY +PE LL    +  L+
Sbjct: 69  LMVDQVAALRQAGVRAEALNSDLSPEERRTLWRDVRAGNVDILYAAPETLLKPDVLDALQ 128

Query: 131 RINISLFAVDEAHCISSWGHDFRPEYTQLKALKQQFPTTPVIALTATADKLTQKDIQEQL 190
            I++SL AVDEAHC+S WGHDFRP Y QL  L  +FP TP +ALTATAD+ T+ +I   L
Sbjct: 129 SIDLSLIAVDEAHCLSQWGHDFRPPYRQLDMLIARFPNTPRMALTATADEPTRAEILGHL 188

Query: 191 YLRNPQVFVASFDRPNINLMVKPGKDRFNKITDFLMRRQKQPGIIYCLSRKATESLADKL 250
            +     F+A FDRPNI   +    +   ++  FL  R+ + GI+YCLS++  E  A  L
Sbjct: 189 AIDEADAFIAGFDRPNIRYAIMEKDNPRTQLKRFLNGRENESGIVYCLSKRKVEETAAWL 248

Query: 251 KRNGFNASYYHAGMSPNQRAKAQEDFLNDDTQIVCATIAFGMGIDKSNVRWVIHYNLPKN 310
           +  G +A  YHAGM    R + Q  F + +  I+ AT+AFGMGIDK +VR+V+H +LP +
Sbjct: 249 REEGRDALPYHAGMDKAAREENQTRFQHGEAVIIVATVAFGMGIDKPDVRFVVHIDLPGS 308

Query: 311 VEGYYQEIGRAGRDGAQSDALLFYSYADVMNLRNMLQDNQNEAQTE--LQLVKLERMQQF 368
           +E YYQE GRAGRDG  SD L+ Y Y D+  LRN   +  + A     ++  KL+ +   
Sbjct: 309 IEAYYQETGRAGRDGLPSDVLMLYGYEDIA-LRNRFIEESDAADQRKYMERQKLDALLGL 367

Query: 369 AEAAACRRRILLQYFGETMQKNCGNCDICRNPPTRFDGTVIAQKALSAIARTQERANMSL 428
           AE A CRR++LL YFG+  +  CGNCD C +PP  F+G + AQK LS I RT ER   + 
Sbjct: 368 AETAGCRRQVLLSYFGDRCEP-CGNCDTCSSPPDLFEGAIAAQKLLSCIYRTGERFGQAY 426

Query: 429 LVDVLRGARNAQVLQAGFDKVKTYGAGRDVSPLDWNRYLHQMLNEGLIEMAYDQGYTLKL 488
           ++ VL GA++ ++ + G D + TYG G++     W   L Q++   LIE+       L +
Sbjct: 427 VISVLLGAQDERITKFGHDSITTYGIGKEHDNRTWRAILRQLVALRLIEVDLSGHGGLSI 486

Query: 489 TEQSKEVLFSDRKVQLVKFEEVKQEEAAVKARPKRELIKDA-------LFEKLRALRKSL 541
           +E  +  L     + L     +     + +    R  +  A       LFE LRA R  +
Sbjct: 487 SENGRRFLREKPSLML----RIPSAPRSTRRDAPRNAMSTALPEADRGLFEALRAKRMEI 542

Query: 542 ADEYGVPPYVIFTDTTLQEMAAERPTNKIAMLAISGVGAQKFERYGDAFITEII 595
           A    VPPYVIF D TL E+AA RP +   M  I+GVG  K ERYG AF+  I+
Sbjct: 543 ARAQNVPPYVIFHDKTLIELAAARPASAKEMAQIAGVGQTKLERYGPAFLDTIM 596