Pairwise Alignments

Query, 260 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 269 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  127 bits (319), Expect = 2e-34
 Identities = 95/258 (36%), Positives = 131/258 (50%), Gaps = 15/258 (5%)

Query: 7   KKHLGQHFLVDQNIAMKIVEQLTLPGNVPDVLEIGPGMGVLTKYLLQHKEYRTTVVDIDR 66
           KK  GQHFL+D N+  KIV +L  P     V+E+GPG G LT+ LL+       +V+ D 
Sbjct: 19  KKSFGQHFLLDLNVTRKIV-RLAGPFEGRAVIEVGPGPGGLTRALLESDAGPVVLVEKDP 77

Query: 67  ESIAYLQQHFPELGE-RIISADFLKTDLSTLFPGRFAIIGNFPYNISSQIFFKVLEHRDV 125
             I  L +     G   I+ AD LK   + L  G   ++ N PYN+ + +  K L    +
Sbjct: 78  RFIPLLTELDDGSGRLTIVEADALKVKEADLVSGPTHLVSNLPYNVGTPLLIKWLTGPWL 137

Query: 126 VPEVVCMIQKEVAERLASPPGSKAYGILSVLLQAFYTIDYKFTVSEHVFNPPPKVKSAVI 185
              +  M QKEVAER+A+ PG  AYG L+V+ QA  T      +    F PPPKV SAV+
Sbjct: 138 PHCLTLMFQKEVAERVAAGPGEDAYGRLAVIAQAVCTARIVMHLPAAAFTPPPKVASAVV 197

Query: 186 GLV----RNNVEKLACDEKMFHQVVKQSFGTRRKTLRNSLRIYNLPPEVLAQPVF---DK 238
            LV    R + E+L    K   +V   +FG RRK LR+SL+   L    L +      D 
Sbjct: 198 HLVPLDERPSPERL----KKLERVTAAAFGQRRKMLRSSLK--QLGGAALCEAAGIEPDA 251

Query: 239 RAEQLSVQDFIELTQLIE 256
           RAE + V  F+ L   ++
Sbjct: 252 RAETIDVAGFLRLADALQ 269