Pairwise Alignments

Query, 848 a.a., ATP-dependent helicase HrpB from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 812 a.a., ATP-dependent helicase HrpB from Serratia liquefaciens MT49

 Score =  591 bits (1523), Expect = e-173
 Identities = 361/845 (42%), Positives = 483/845 (57%), Gaps = 44/845 (5%)

Query: 10  LPDLPVKEALPRLLQVLNTSNRAVLEAPPGAGKTTLVPLALLEADWRGDGKILVLEPRRL 69
           +  LPV   L  LL  L ++ + +L AP GAGK+T +PL +L A     G+I++LEPRRL
Sbjct: 1   MSSLPVSAVLDELLTALQSAPQVLLHAPTGAGKSTWLPLQIL-AKAGLPGRIIMLEPRRL 59

Query: 70  ATRAAAERMADLLGEPVGQTVGYWVRMDHKVSRKTRVEVVTEGILTRIIQDDPALEGVAA 129
           A +  A R+A  LGE  GQTVGY +R + K   +T++ VVTEGILTR++Q D  L+GV+ 
Sbjct: 60  AAKNVAYRLAQQLGEEPGQTVGYRMRAESKSGPETKLLVVTEGILTRMLQQDAELQGVSL 119

Query: 130 IIFDEFHERNLQADLGLALALDAQAVLRPDLRLLVMSATLDATAIGQWL-QAPVVQSEGR 188
           +I DEFHER+LQADL LAL LD Q  LR DL+LL+MSATLD   + Q L QAP V S GR
Sbjct: 120 VILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNARLAQLLPQAPAVVSAGR 179

Query: 189 LFPVQTHFLSPAEVAAAGNYPSQRLATLTPKAIRQALSQEAEGDLLVFLPGMGEIKKVAQ 248
            FPV+  +   A          QRL      A+++ LS++  G LL+FLPG+ EI +V +
Sbjct: 180 SFPVERQYQPLAS--------HQRLEDGVAAAVKRLLSEQT-GSLLLFLPGVAEINRVLE 230

Query: 249 QLENTLGPAIELHLLHGDLPLSKQVAAIQPSPKGKRKVVLATSIAETSLTIEGVTIVVDG 308
           +L   +    EL  L+G LPL++Q  AIQP+P G+RKVVLAT+IAETSLTIEG+ +VVD 
Sbjct: 231 RLNGEVAADTELCPLYGALPLAQQQKAIQPAPTGRRKVVLATNIAETSLTIEGIRLVVDS 290

Query: 309 GFARVPRFTPRTGLTTLATVPVSQAGADQRRGRAGRLGPGVCYRLWSTADQMQLPPRQSP 368
           G  RV R+  R GLT L T  VSQA   QR GRAGRL PG+C+ L++     +      P
Sbjct: 291 GLERVARYDVRNGLTRLVTQRVSQASMIQRAGRAGRLEPGICWHLFAKEQAERAAEHAEP 350

Query: 369 EILDADLTGLVLELALWGVKDATTLNWLDSPPAAALALAKDLLQRLEALDAAGNPTPHGK 428
           EIL +DL G  LEL  WG  D   L WLD PP  ALA AK LLQ+L A D A   T  G+
Sbjct: 351 EILQSDLAGFWLELLQWGCHDVGQLTWLDRPPETALAAAKRLLQQLGATDDADKLTARGR 410

Query: 429 ALASLGIHPRLGHLVMRGHELGFG--ATACALAALLSERDVLKPLQLGWGEGIPDLQLRL 486
            +A LG  PRL  ++  G ELG    ATA ALAALL E      + +G+    P      
Sbjct: 411 QMAVLGCEPRLAAMLTHGAELGADGLATAAALAALLEEPPRGGQMDIGYWLSRPQ----- 465

Query: 487 ELIAGKSPVTPGFVVDENALRRVKEQAQNLRQRLRDATGNLHPELAGLLTALAYPDRLAQ 546
                     P +          + +A  L +RL+   G +  ELA  L ALA+ DR+AQ
Sbjct: 466 ----------PNW----------QRRATQLARRLQVKAGRIDVELAPRLLALAFTDRIAQ 505

Query: 547 REA-PGRVRLVSGQRASL-ATELFGEAEFYSIAHLDLG---KQPRILLAAPLAKSDLLEH 601
           R    GR  L +G  A++   E    A +  +  L  G      RILLA P+    L   
Sbjct: 506 RRGQDGRYLLANGMGAAMNQDEALSRAPWLIVPSLLQGHNSPDARILLALPVEIDALAAQ 565

Query: 602 FSEQVEVLQEVRWHEGSQQVVARHLTRLGALLVEESTVSKPDADKVAAALLQALQEKGVE 661
               V     V W E    + A    ++G L +    ++KP  +++  AL+  ++ +G+ 
Sbjct: 566 LPAMVSQQTAVEWDEEKGTLRAWKRQQIGRLTLRAQPLAKPADEELQQALINWVRAQGIA 625

Query: 662 RLPWSEEALRTRQRLAFLHRLEPE-NWPDTSDAALAASMDSWLAPHLHGLRTLDQVARLD 720
            L W   A + R RL       PE  WP   D +L AS++ WL P L G+R +  + +++
Sbjct: 626 VLNWDTAAEQLRLRLQCAQNWLPEAAWPPVDDESLLASLEKWLLPSLGGVRDMRGLKQVN 685

Query: 721 FKEILLAELAWEQRQEMERLAPSHLQVPSGSRIALDYSDAASPVLAVRLQEVFGLLDTPR 780
             E L   L W+Q+Q ++   P+H  VP+GSR+ + Y     P LAVRLQEVFG   +P 
Sbjct: 686 IAEALARLLNWQQKQRLDNALPTHYTVPTGSRLPIRYDAGKPPALAVRLQEVFGEQRSPM 745

Query: 781 VGGGKVPLLLHLLSPASRPVQVTRDLRSFWSNGYFEVRKDLRGRYPKHHWPDDPLTAPPT 840
           +  G++P++L LLSPA RP+Q+T DL +FW   Y EV+K+++GRYPKH WPDDP    PT
Sbjct: 746 LAEGRIPVVLELLSPAHRPLQITGDLAAFWQGAYREVQKEMKGRYPKHVWPDDPANTAPT 805

Query: 841 RGTKK 845
           R TKK
Sbjct: 806 RRTKK 810