Pairwise Alignments

Query, 848 a.a., ATP-dependent helicase HrpB from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1295 a.a., ATP-dependent RNA helicase HrpA from Serratia liquefaciens MT49

 Score =  243 bits (619), Expect = 7e-68
 Identities = 161/460 (35%), Positives = 241/460 (52%), Gaps = 12/460 (2%)

Query: 12  DLPVKEALPRLLQVLNTSNRAVLEAPPGAGKTTLVPLALLEADWRGDGKILVLEPRRLAT 71
           +LPV +    +LQ +      ++    G+GKTT +P   LE      G I   +PRRLA 
Sbjct: 72  NLPVSQKKQDILQAIRDHQVVIVAGETGSGKTTQLPKICLELGRGVKGLIGHTQPRRLAA 131

Query: 72  RAAAERMADLLGEPVGQTVGYWVRMDHKVSRKTRVEVVTEGILTRIIQDDPALEGVAAII 131
           R  A R+AD L  P+G +VGY VR + +V   T V+++T+GIL   IQ D  L     +I
Sbjct: 132 RTVANRIADELETPLGGSVGYKVRFNDQVGENTLVKLMTDGILLAEIQQDRLLMQYDTLI 191

Query: 132 FDEFHERNLQADLGLALALDAQAVLRPDLRLLVMSATLDATAIGQWLQ-APVVQSEGRLF 190
            DE HER+L  D  L   L      RPDL++++ SAT+D     +    AP+++  GR +
Sbjct: 192 IDEAHERSLNIDFILGY-LRELLPKRPDLKVIITSATIDPQRFSRHFNNAPIIEVSGRTY 250

Query: 191 PVQTHFLSPAEVAAAGNYPSQRLATLTPKAIRQALSQEAEGDLLVFLPGMGEIKKVAQQL 250
           PV+  +    +   A +    +L  +        L +E  GD+L+F+ G  EI+  A  L
Sbjct: 251 PVEVRYRPVVD--DADDTDRDQLQAIFDAV--DELGREGPGDILIFMSGEREIRDTADAL 306

Query: 251 ENTLGPAIELHLLHGDLPLSKQVAAIQPSPKGKRKVVLATSIAETSLTIEGVTIVVDGGF 310
                P  E+  L+  L  S+Q    Q S  G+R +VLAT++AETSLT+ G+  V+D G 
Sbjct: 307 NRLNLPHTEVLPLYARLSNSEQNRVFQ-SHHGRR-IVLATNVAETSLTVPGIKYVIDPGT 364

Query: 311 ARVPRFTPRTGLTTLATVPVSQAGADQRRGRAGRLGPGVCYRLWSTADQMQLPPRQSPEI 370
           AR+ R++ RT +  L   PVSQA A+QR+GR GR+  G+C RL+S  D +  P    PEI
Sbjct: 365 ARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSDGICIRLYSEQDFLSRPEFTDPEI 424

Query: 371 LDADLTGLVLELALWGVKDATTLNWLDSPPAAALALAKDLLQRLEALDAAGNP----TPH 426
           L  +L  ++L++   G+ D     ++++P    +     LL+ L A+  A N     TP 
Sbjct: 425 LRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNILDGVRLLEELGAIKTADNGHYQLTPQ 484

Query: 427 GKALASLGIHPRLGHLVMRGHELGFGATACALAALLSERD 466
           G+ LA L I PRL  +V+   + G       + A LS +D
Sbjct: 485 GRQLAQLPIDPRLARMVLEAQKSGSVREVMIITAALSIQD 524