Pairwise Alignments

Query, 848 a.a., ATP-dependent helicase HrpB from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 809 a.a., putative ATP-dependent helicase from Escherichia coli BL21

 Score =  597 bits (1540), Expect = e-175
 Identities = 364/844 (43%), Positives = 495/844 (58%), Gaps = 45/844 (5%)

Query: 10  LPDLPVKEALPRLLQVLNTSNRAVLEAPPGAGKTTLVPLALLEADWRGDGKILVLEPRRL 69
           +  LPV   LP LL  L+ + + +L AP GAGK+T +PL LL A    +GKI++LEPRRL
Sbjct: 1   MSSLPVAAVLPELLTALDCAPQILLSAPTGAGKSTWLPLQLL-AHPGINGKIILLEPRRL 59

Query: 70  ATRAAAERMADLLGEPVGQTVGYWVRMDHKVSRKTRVEVVTEGILTRIIQDDPALEGVAA 129
           A R  A+R+A+LL E  G TVGY +R  + V   TR+EVVTEG+LTR+IQ DP L GV  
Sbjct: 60  AARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGL 119

Query: 130 IIFDEFHERNLQADLGLALALDAQAVLRPDLRLLVMSATLDATAIGQWL-QAPVVQSEGR 188
           +I DEFHER+LQADL LAL LD Q  LR DL+LL+MSATLD   + Q L +APVV SEGR
Sbjct: 120 VILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGR 179

Query: 189 LFPVQTHFLS-PAEVAAAGNYPSQRLATLTPKAIRQALSQEAEGDLLVFLPGMGEIKKVA 247
            FPV+ H+L  PA          QR       A  + L QE+ G LL+FLPG+GEI++V 
Sbjct: 180 SFPVERHYLPLPAH---------QRFDEAVAVATAEMLRQES-GSLLLFLPGVGEIQRVQ 229

Query: 248 QQLENTLGPAIELHLLHGDLPLSKQVAAIQPSPKGKRKVVLATSIAETSLTIEGVTIVVD 307
           +QL + +G  + L  L+G L L+ Q  AI P+P+G RKVVLAT+IAETSLTIEG+ +VVD
Sbjct: 230 EQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVD 289

Query: 308 GGFARVPRFTPRTGLTTLATVPVSQAGADQRRGRAGRLGPGVCYRLWSTADQMQLPPRQS 367
               RV RF PRTGLT L T  VSQA   QR GRAGRL PG+C  L +     +   +  
Sbjct: 290 CAQERVARFEPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLHLIAKEQAERSAAQSE 349

Query: 368 PEILDADLTGLVLELALWGVKDATTLNWLDSPPAAALALAKDLLQRLEALDAAGNPTPHG 427
           PEIL +DL+GL++EL  WG  D   ++WLD PP   L  AK LLQ L ALD     +  G
Sbjct: 350 PEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLMAAKRLLQMLGALDGE-RLSAQG 408

Query: 428 KALASLGIHPRLGHLVMRGHELGFGATACALAALLSERDVLKPLQLGWGEGIPDLQLRLE 487
           + +A+LG  PRL  +++        ATA  +AA+L E   +                   
Sbjct: 409 QKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRM------------------- 449

Query: 488 LIAGKSPVTPGFVVDENALRRVKEQAQNLRQRLRDATGNLHPELAGLLTALAYPDRLAQR 547
              G S +   F  ++ A    ++++Q L +RL    G     L   L A A+ DR+A R
Sbjct: 450 ---GNSDLGVAFSRNQPAW---QQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIAHR 503

Query: 548 EA-PGRVRLVSGQRASLATELFGEAEFYSIAHLDL----GKQPRILLAAPLAKSDLLEHF 602
               GR +L +G  A L  +       + IA L L        RILLA P+   +L++  
Sbjct: 504 RGQDGRYQLANGMGAMLDADDALSRHEWLIAPLLLQGSASPDARILLALPVDIDELVQRC 563

Query: 603 SEQVEVLQEVRWHEGSQQVVARHLTRLGALLVEESTVSKPDADKVAAALLQALQEKGVER 662
            + V+    V W +    + A    ++G L V+   ++KP  D++  A+L  +++KG+  
Sbjct: 564 PQLVQQSDTVEWDDAQGTLKAWRRLQIGQLTVKVQPLAKPSEDELHQAMLNGIRDKGLSV 623

Query: 663 LPWSEEALRTRQRLAFLHRLEPE-NWPDTSDAALAASMDSWLAPHLHGLRTLDQVARLDF 721
           L W+ EA + R RL    +  PE +WP   + +L A++++WL PH+ G+ +L  +  LD 
Sbjct: 624 LNWTAEAEQLRLRLLCAAKWLPEYDWPAVDNESLLATLETWLLPHMTGVHSLRGLKSLDI 683

Query: 722 KEILLAELAWEQRQEMERLAPSHLQVPSGSRIALDYSDAASPVLAVRLQEVFGLLDTPRV 781
            + L   L W  +Q ++   P+H  VP+GSRIA+ Y +   P LAVR+QE+FG    P +
Sbjct: 684 YQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATNPTI 743

Query: 782 GGGKVPLLLHLLSPASRPVQVTRDLRSFWSNGYFEVRKDLRGRYPKHHWPDDPLTAPPTR 841
             G+VPL+L LLSPA RP+Q+TRDL +FW   Y EV+K+++GRYPKH WPDDP    PTR
Sbjct: 744 AQGRVPLVLELLSPAQRPLQITRDLSAFWKGAYREVQKEMKGRYPKHVWPDDPANTAPTR 803

Query: 842 GTKK 845
            TKK
Sbjct: 804 RTKK 807