Pairwise Alignments

Query, 815 a.a., ATP-dependent helicase HrpB from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 812 a.a., ATP-dependent helicase HrpB from Serratia liquefaciens MT49

 Score =  512 bits (1319), Expect = e-149
 Identities = 310/813 (38%), Positives = 465/813 (57%), Gaps = 30/813 (3%)

Query: 10  LPVREIIPAVREHLAAQNTLIVNAPPGAGKSTLLPLAILDEVWLTGQKIVMLEPRRLAAK 69
           LPV  ++  +   L +   ++++AP GAGKST LPL IL +  L G +I+MLEPRRLAAK
Sbjct: 4   LPVSAVLDELLTALQSAPQVLLHAPTGAGKSTWLPLQILAKAGLPG-RIIMLEPRRLAAK 62

Query: 70  TIAERLAQLLGEEVGQSVGYRIRFETRISERTRIEVVTEGILTRMIHSDRALTGIGIVIF 129
            +A RLAQ LGEE GQ+VGYR+R E++    T++ VVTEGILTRM+  D  L G+ +VI 
Sbjct: 63  NVAYRLAQQLGEEPGQTVGYRMRAESKSGPETKLLVVTEGILTRMLQQDAELQGVSLVIL 122

Query: 130 DEFHERSIHADVAMALSREAQHTLRPDLRIMVMSATLDMPQLTSLL-KAPVAQSMGRQYP 188
           DEFHERS+ AD+A+AL  + Q  LR DL++++MSATLD  +L  LL +AP   S GR +P
Sbjct: 123 DEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNARLAQLLPQAPAVVSAGRSFP 182

Query: 189 IETHYTGDADDRMLPEMTAKVIKQAAQEQEGDILVFLPGEGDIRKVETILRRELR-NFQI 247
           +E  Y   A  + L +  A  +K+   EQ G +L+FLPG  +I +V   L  E+  + ++
Sbjct: 183 VERQYQPLASHQRLEDGVAAAVKRLLSEQTGSLLLFLPGVAEINRVLERLNGEVAADTEL 242

Query: 248 HPLFGMLPFGKQYAAIMPDRQGRRKVVLATSIAETSLTIEGISVVVDTGFGKTSRFDPKS 307
            PL+G LP  +Q  AI P   GRRKVVLAT+IAETSLTIEGI +VVD+G  + +R+D ++
Sbjct: 243 CPLYGALPLAQQQKAIQPAPTGRRKVVLATNIAETSLTIEGIRLVVDSGLERVARYDVRN 302

Query: 308 GLSRLETVRISKDAADQRAGRAGRLGPGTAYRMWSKTTHERMAPHRTPEIMEADLSSLVL 367
           GL+RL T R+S+ +  QRAGRAGRL PG  + +++K   ER A H  PEI+++DL+   L
Sbjct: 303 GLTRLVTQRVSQASMIQRAGRAGRLEPGICWHLFAKEQAERAAEHAEPEILQSDLAGFWL 362

Query: 368 DMAQWGITDIRGLTWLNPPPRAALQYATDMLHQLQALEHG-RITEHGKRMHALPCHPRIA 426
           ++ QWG  D+  LTWL+ PP  AL  A  +L QL A +   ++T  G++M  L C PR+A
Sbjct: 363 ELLQWGCHDVGQLTWLDRPPETALAAAKRLLQQLGATDDADKLTARGRQMAVLGCEPRLA 422

Query: 427 HMLLKAEE--TDQVALASDIASVLEERDPLDRNAGIDINLRVEALRRYRKEQGQGKRFSK 484
            ML    E   D +A A+ +A++LEE     R   +DI         Y   + Q     +
Sbjct: 423 AMLTHGAELGADGLATAAALAALLEEP---PRGGQMDIG--------YWLSRPQPNWQRR 471

Query: 485 IEKIARSYRSLFEVDPENGSFDDYETGVLLAHCYPERIAYARPGNNAQFQLASGQYASAG 544
             ++AR       +  + G  D      LLA  + +RIA  R G + ++ LA+G  A+  
Sbjct: 472 ATQLAR------RLQVKAGRIDVELAPRLLALAFTDRIAQRR-GQDGRYLLANGMGAAMN 524

Query: 545 HRDDLAHESWLAIAHLHAGTGDNPGRIFLASPLN----PRDLAPLVKQQESYHWDVNDGE 600
             + L+   WL +  L  G      RI LA P+        L  +V QQ +  WD   G 
Sbjct: 525 QDEALSRAPWLIVPSLLQGHNSPDARILLALPVEIDALAAQLPAMVSQQTAVEWDEEKGT 584

Query: 601 LTASMDTRIGSIVLQSKPLPPPDEKHRIPAISEAIKLEGEHLLDFNEELTQWQNRVLSLR 660
           L A    +IG + L+++PL  P ++    A+   ++ +G  +L+++    Q + R+   +
Sbjct: 585 LRAWKRQQIGRLTLRAQPLAKPADEELQQALINWVRAQGIAVLNWDTAAEQLRLRLQCAQ 644

Query: 661 KWRPAEGWPDVSTSTLLMTNWDWLRPHLSDIEHPDELMELELLPILEKKYLDEAQRERLE 720
            W P   WP V   +LL +   WL P L  +     L ++ +   L  + L+  Q++RL+
Sbjct: 645 NWLPEAAWPPVDDESLLASLEKWLLPSLGGVRDMRGLKQVNIAEAL-ARLLNWQQKQRLD 703

Query: 721 VLAPASINLLDGSSIELEYKAQGEQPKLEIRLQDILAWEESPTVDAGEMKVELHLLTPEL 780
              P    +  GS + + Y A G+ P L +RLQ++   + SP +  G + V L LL+P  
Sbjct: 704 NALPTHYTVPTGSRLPIRYDA-GKPPALAVRLQEVFGEQRSPMLAEGRIPVVLELLSPAH 762

Query: 781 KPITTVSDLASFWKGNYRVIKRQLEAVFPEVKW 813
           +P+    DLA+FW+G YR ++++++  +P+  W
Sbjct: 763 RPLQITGDLAAFWQGAYREVQKEMKGRYPKHVW 795