Pairwise Alignments

Query, 199 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 196 a.a., RNA polymerase, sigma-24 subunit, RpoE from Kangiella aquimarina DSM 16071

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 13/173 (7%)

Query: 18  DAELLRLYRQTGELEHLGELFQRHSEMVYLVCLKYLREEEESKDATMHLFEHLATALLQH 77
           D+EL++   Q G+      L +++   +  +  +Y+R+  E  D +   F     AL   
Sbjct: 7   DSELVKRV-QEGDKRAFDMLVKKYQHKIMNLISRYVRDSHEVADISQEAFIKAYRALPGF 65

Query: 78  EV-SNFKSWLYA----TAKNHCLMQLRAKKGQPGTGLDETSALFVENQEPLHLSEAEQR- 131
              S F +WLY     TAKN+ + Q R     PG+ +D   A   E  + L  + + +R 
Sbjct: 66  RGDSAFYTWLYRIAINTAKNYLVSQGRRP---PGSDIDSVEAEQYEGGDALRDTGSPERI 122

Query: 132 ---EETEQLLQQALQQLPPAQYTCVELFYLQQKSYKEIADLTGHELSKVKSYI 181
              +E   ++ + + +LP    T + L  +   SY+EIA++    +  V+S I
Sbjct: 123 MFRDEIRNIIFKTIDELPEDLKTAITLREMDGLSYEEIAEVMDCPVGTVRSRI 175