Pairwise Alignments

Query, 398 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 605 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  187 bits (474), Expect = 9e-52
 Identities = 123/395 (31%), Positives = 194/395 (49%), Gaps = 27/395 (6%)

Query: 23  QHS-EAAAETTYTCPMHPQVVQSEPGICPICHMDLVPVAQNG---ADKGELMLSESQIAL 78
           QH+ E A ET +TC MHPQ+ QSEPG CPIC MDL+P+ ++     D   + +S + + L
Sbjct: 39  QHTAEEAGETVWTCSMHPQIKQSEPGDCPICGMDLIPLEEDQNEVLDPMAISMSPTAMQL 98

Query: 79  GNIKTKRVKLGDVSSNTILTGKLVLDETQTDVISSRAQGRVEKLYIKETGQTVQKGQPLY 138
            NI T  V   D      L GK+  DE      SS   GR+E+L +  TG+ V KGQ + 
Sbjct: 99  ANITTSAVGTMDPVKTVRLNGKVQEDERLVSSQSSHISGRIERLNVSFTGEYVNKGQVIA 158

Query: 139 ELYSEELLTLQREYLLALKQNQELGEENPRFASFLEAARKKLLLYGLTESQIRSLARTGS 198
            +YS EL+T Q E    L + Q++ E  P+     ++AR KL  + L++ QI  +   GS
Sbjct: 159 YIYSPELVTAQEE----LFEAQKIKETQPQL---FKSARTKLKNWKLSDGQIDKILERGS 211

Query: 199 LDARVTFVAPTAGVITDVAAAEGQYVAEGAVLYRVGKLGKIWVEAELYPQEVANVQAGDE 258
                   A  +G + +     G Y+  G  +Y +  L ++WV  ++Y  E++ +  GD+
Sbjct: 212 PSDDFPITADISGYVLNKNVIVGDYIKRGEPVYEIANLSRVWVLFDVYESEMSWISKGDQ 271

Query: 259 VLVSVQGFAEEAVPASVTFISPEYRQGSQVAVLRAELPNKNEQYLPGM----QANVSLPG 314
           V  +VQ    +     ++F+ P     ++VA  R E+ N + Q  P M         LP 
Sbjct: 272 VRFTVQSLPGQTFEGKISFLDPVIDPKTRVAKARVEVRNNDNQLKPEMFVSGTVEAMLPN 331

Query: 315 KNGSDLVLPNDAVIQDASGSHVWVQTGKNT---FRARMVTIGEESADNVAILSGIQENDK 371
           K  + +V+P  AV+     S V+V+    +   F  R V +G    D+  + SG+QE ++
Sbjct: 332 K-ANTVVIPKTAVMWTGKRSVVYVKNTSGSGVNFIMREVMLGPGLGDSFIVESGLQEGEE 390

Query: 372 VVTSGAYLLYSEFVL--------KKGADPMAGHNH 398
           +  +G + + +   L         +G   M GHNH
Sbjct: 391 IAVNGTFSIDAAAQLVGKPSMMNPEGGPTMTGHNH 425