Pairwise Alignments

Query, 441 a.a., mechanosensitive ion channel protein MscS from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 433 a.a., mechanosensitive channel of miniconductance from Pseudomonas putida KT2440

 Score =  287 bits (734), Expect = 5e-82
 Identities = 155/384 (40%), Positives = 236/384 (61%), Gaps = 1/384 (0%)

Query: 36  LLALLLLLLYTSKIATRTALRGTAHRFAAKTSTQFDDYLIQNRVFSLIAQAVPLVIVVQA 95
           L  LLL+ L   ++A    L G A   A + + ++ D L  N+VF  +AQ  P +++   
Sbjct: 29  LAVLLLISLVVGRLARFLILHG-ARLLARQPALKWLDDLRHNKVFHRLAQTTPSLVLQFG 87

Query: 96  LPIVFADFEAWIKPLRTLVDAYIVLLSIWTLQALLRTCRDFMKTTALFKDKPVDSFVQVL 155
           L +V    +     L  +  A+ +L     L  LL    D    T   + + +  +VQ+ 
Sbjct: 88  LKLVPELSDTAQHFLGNVALAFTLLFMTMALSCLLDALLDIYARTEHARTRSIKGYVQLA 147

Query: 156 TIFLYFVGGLLIFSLLTGKSVWAFITAMGAASAILLLVFKDTILGFVASIQVSTNDMVRI 215
            + L+    ++I + L  +S    ++ +GA SA+LLLV+KDT+L FVAS+Q+++NDM+ +
Sbjct: 148 KMMLWIFASIIIVATLIDRSPLLLLSGLGAMSAVLLLVYKDTLLSFVASVQLTSNDMLHV 207

Query: 216 GDWITMEKYGADGTVVEINLTTVKVQNFDMTITTIPTYYLISDSFINWRGMQAAGGRRIK 275
           GDWI M + GADG VV+I L TVKVQNFD TI +IPT+ L+S+SF N+RGMQ +GGRRIK
Sbjct: 208 GDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWRLMSESFRNYRGMQQSGGRRIK 267

Query: 276 RSIHIKISSIKYLSEEDVQRLSKIGLVSEYLQERQQEIAAYNKAKHVDKHLLINGRSLTN 335
           RS+ I  + +++L+ E+ QRLS++ L+S+YL  ++QE+  +N+A      L  N R LTN
Sbjct: 268 RSLFIDAAGVRFLTREEEQRLSQVQLLSDYLAGKRQELQNWNEALGPVADLSANRRKLTN 327

Query: 336 IGVFRRYIDAYIQQHEFTHKHMTMMVRQLEPTTTGMPIELYVFTNEVRWEKYELIMADIF 395
           IG FR +  AY++ H   H +MT MVRQ++ T  G+P+E+Y FT    W  YE I  DIF
Sbjct: 328 IGTFRAFALAYLKNHPNVHPNMTCMVRQMQTTAEGVPLEIYCFTTTTVWADYERIQGDIF 387

Query: 396 DHLLAAVRYFDLEVFEYPAADDVR 419
           D+LLA +  F L +++ P+ +D+R
Sbjct: 388 DYLLAVLPEFGLSLYQQPSGNDMR 411