Pairwise Alignments

Query, 202 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 185 a.a., RNA polymerase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 86.3 bits (212), Expect = 3e-22
 Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 12/180 (6%)

Query: 17  LIQAAVEENDEKAYAELMSIYKKPVYHVVLKMVRNADDAEDLTIEAFAKAFKNLHKFNPE 76
           L+    +  + +A  EL  +Y K +++V +++  +  +AED+  EAF  AFKNLH +  E
Sbjct: 12  LVIERCKSGEHRAQYELYKLYAKAMFNVSMRITNDYAEAEDVLQEAFVSAFKNLHSYKAE 71

Query: 77  YAFSTWLFRIATNNCIDFIRKNRIKTMSIDSAIKIDNGDEITIDFKDKNLNPQEEAIKNQ 136
            +F +WL +I  N  I+ IRK R + + +D  +     DE + D  +             
Sbjct: 72  ASFGSWLKKIVVNAAINAIRKRRAELVPMDERLVAGVPDEKSDDEPE------------W 119

Query: 137 KIEIMQYVVAKLPEKYQRLVTLRYFNELSYEEIATELNAPLGTVKAQLHRARELLYDMVK 196
           +IE ++  + KLP+ Y+ +++L       + EI   L     T K+Q  RAR+ L +++K
Sbjct: 120 QIEQVRRAIQKLPDGYRLVLSLYLLEGYDHAEIGEILGISESTSKSQYSRARKKLLEIMK 179