Pairwise Alignments

Query, 202 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 179 a.a., RNA polymerase subunit sigma from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 92.8 bits (229), Expect = 3e-24
 Identities = 53/177 (29%), Positives = 99/177 (55%), Gaps = 11/177 (6%)

Query: 21  AVEENDEKAYAELMSIYKKPVYHVVLKMVRNADDAEDLTIEAFAKAFKNLHKFNPEYAFS 80
           A  E+   A+ +L+  Y++ +Y  + KMV + DDA+DLT E F K +KNL  F  +    
Sbjct: 11  AQPESRNMAFNQLVRKYQQKIYWHIRKMVIDHDDADDLTQEVFLKVWKNLDNFRQDAQLY 70

Query: 81  TWLFRIATNNCIDFI-RKNRIKTMSIDSAIKIDNGDEITIDFKDKNLNPQEEAIKNQKIE 139
           TW++RIATN C+ F+  K R   + +         +++T +  +K  +  + A  ++  +
Sbjct: 71  TWIYRIATNECLSFLSSKKRRFFLPL---------NDVTAELMEKVASSPDLA-GDEVQQ 120

Query: 140 IMQYVVAKLPEKYQRLVTLRYFNELSYEEIATELNAPLGTVKAQLHRARELLYDMVK 196
            +Q  + +LP+K + +  ++YF+E+ YEE++  L   +G +KA  H A + + + +K
Sbjct: 121 KLQKAILRLPDKQRLVFNMKYFDEMKYEEMSQILGTSVGALKASYHIAVKKVEEFLK 177