Pairwise Alignments

Query, 202 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 203 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  254 bits (649), Expect = 7e-73
 Identities = 124/203 (61%), Positives = 164/203 (80%), Gaps = 1/203 (0%)

Query: 1   MEVNKQ-FSAKAKHDFKLIQAAVEENDEKAYAELMSIYKKPVYHVVLKMVRNADDAEDLT 59
           ME+N++ FS KA  DF LI  AV++ D++AYA LM  YKK VY ++LKM+R+ADDAEDLT
Sbjct: 1   MEINERGFSDKALEDFDLIDQAVDQKDQQAYATLMKRYKKAVYFMILKMIRDADDAEDLT 60

Query: 60  IEAFAKAFKNLHKFNPEYAFSTWLFRIATNNCIDFIRKNRIKTMSIDSAIKIDNGDEITI 119
           +EAFAKAF+NLHKF  +Y FSTWLFRIATNN IDFIRK ++KTMS+++ +  D G+ + I
Sbjct: 61  MEAFAKAFRNLHKFKKDYTFSTWLFRIATNNTIDFIRKKKLKTMSLNNTLTDDGGNSVNI 120

Query: 120 DFKDKNLNPQEEAIKNQKIEIMQYVVAKLPEKYQRLVTLRYFNELSYEEIATELNAPLGT 179
           D +D + NPQ+E IK+Q+IE+++  V KLP KY++LV LRYF+ELSY+EIA EL+ PLGT
Sbjct: 121 DVEDDDNNPQDEFIKSQRIEMVRIFVDKLPAKYRKLVKLRYFDELSYDEIAQELDKPLGT 180

Query: 180 VKAQLHRARELLYDMVKNKKHLI 202
           VKAQLHR+RELLY++ + K+  I
Sbjct: 181 VKAQLHRSRELLYEIAQGKQKYI 203