Pairwise Alignments

Query, 534 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 499 a.a., lysyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  387 bits (994), Expect = e-112
 Identities = 221/498 (44%), Positives = 301/498 (60%), Gaps = 23/498 (4%)

Query: 40  RREKLKALREAQKQGQGVAFPNDFKPVDKAADLFARYGETTKEALEAEPVRASVAGRMML 99
           RR+KL  LRE      G  +P  F      A+L  +Y +   +    + V  +VAGR+  
Sbjct: 19  RRQKLALLREQI----GDVYPAHFHRTLSNAELAEKYADIEADVETGDTV--TVAGRVYS 72

Query: 100 KRVMGKASFATLQDASFGPSGGRIQIYVNNDGVGEAQHGAFKHWDLGDIIAVEGVLMRTR 159
            R  G   F  + DAS     G++QI+ + D   EA        D+GDII V G + RT+
Sbjct: 73  SRNSGM--FMDIHDAS-----GKVQIFSHKDTTPEAARNLLPMIDIGDIIGVTGKVRRTK 125

Query: 160 TGELTIQADRIRLITKSLRPLPDKFHGIADQEIKYRQRYVDLMTDETARRRFVARSQALA 219
            GELTI A+ I ++TKSL P+P+K+HG++D E++YR+R++D++ +E ++ RF+ RS+ L+
Sbjct: 126 RGELTINAEEITMLTKSLLPMPEKWHGVSDIELRYRKRHLDILANEDSKLRFLQRSKILS 185

Query: 220 SIRDFMVSHGFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRLLVGGF 279
            IR FM + GFLEVETPML  + GGA A PFKT HN L  +M+LRIAPEL+LKR LV G 
Sbjct: 186 GIRRFMEAEGFLEVETPMLQTVYGGATADPFKTFHNTLKMDMYLRIAPELFLKRTLVSGL 245

Query: 280 -DRVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMDFNEQLIRHVVRQVRGDEPL 338
            D+VFEINRNFRNEG+S RHNPEFTMME Y AY +Y+D+M   E+L   +   + G   +
Sbjct: 246 SDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDIMGLVERLFETLAIALHGTTEV 305

Query: 339 TYQGQPVDILSPFERLTIREAIVKYTD---AGDSVDDAAWLQAQLKKLGLSEEKHQLSGR 395
            +QGQ +    PF+R+ + +A+ + T         D+ A  +A  K  G + EK    G 
Sbjct: 306 EFQGQTISFKGPFKRVPMPDAVKEATGIDFLAIKTDEEA--RAAAKAAGFAVEKDWTWGE 363

Query: 396 SLPSLQVLYFEEKVEDKLWNPTFIMDHPTEISPLARANDANPAVTERFELYITGREFGNA 455
            L       FEEKVE  L  P+ +   P +ISP A+     P + ERFE Y    E GNA
Sbjct: 364 CL----AFIFEEKVEATLIQPSHVTHFPKDISPFAKEVPGEPRLVERFESYCNAWEVGNA 419

Query: 456 FSELNDAEDQAARFQAQASAKDGGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLMMLL 515
           FSELND E+Q  R   Q        E+    D +++ A++ GMPPAGG GIG+DRL+MLL
Sbjct: 420 FSELNDPEEQRRRMVEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLL 479

Query: 516 TDSPSIRDVILFPALRRE 533
           T++PSIRDVILFPA R +
Sbjct: 480 TNAPSIRDVILFPARRNK 497