Pairwise Alignments

Query, 309 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 308 a.a., branched-chain amino acid ABC transporter permease from Escherichia coli BL21

 Score =  244 bits (623), Expect = 2e-69
 Identities = 130/305 (42%), Positives = 199/305 (65%), Gaps = 19/305 (6%)

Query: 5   LQQIINGLVLGSMYALVALGYTMVYGIIGLINFAHGDVLMVGALTSWTVIG--WMMNAST 62
           LQQ+ NG+ LGS YAL+A+GYTMVYGIIG+INFAHG+V M+G+  S+ +I    MM   T
Sbjct: 9   LQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDT 68

Query: 63  GLPTWLILFLATIIAMVVCATLNFTIEKLAYRPLRNSNRLAPLITAIGMSLLLQTFAMII 122
           G   WL++    + A+V+ +   ++IE++AYRP+RNS RL  LI+AIGMS+ LQ +  + 
Sbjct: 69  G---WLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLT 125

Query: 123 WAPNPKSYPSMLSREPIAIG-----GAVVSVTQVVILATTAVTLAFLMWLVNRTNLGRAM 177
                 + PS+ + + + +G      A ++  Q VI   T + +  L   +  + +GRA 
Sbjct: 126 EGSRDVALPSLFNGQWV-VGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 178 RATAENPRVAALMGIKPDVVISATFIIGAMLAAIAGVMWASNYGTVQHAMGFMPGLKAFV 237
           RA AE+ ++A+L+GI  D VI+ TF+IGA +AA+AGV+    YG +   +GFM G+KAF 
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFT 244

Query: 238 AAVMGGIGNLAGAVVGGIALGLIESLGAGYLGKLTGGVLGSQYTDIFAFIVLAIVLTLRP 297
           AAV+GGIG++ GA++GG+ LG+ E+L + Y        L ++Y D+ +F +L +VL + P
Sbjct: 245 AAVLGGIGSIPGAMIGGLILGIAEALSSAY--------LSTEYKDVVSFALLILVLLVMP 296

Query: 298 SGLLG 302
           +G+LG
Sbjct: 297 TGILG 301