Pairwise Alignments

Query, 540 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

 Score =  785 bits (2026), Expect = 0.0
 Identities = 361/532 (67%), Positives = 432/532 (81%), Gaps = 6/532 (1%)

Query: 1   MSAVLDHHDAHGHDDHDHHAPTGWRRWVYATNHKDIGTLYLLFAFTMLMVGGVLALLIRA 60
           MSAV+D H   GH DH H    G  RWV  TNHKDIGTLYL FAF M ++GG  A++IRA
Sbjct: 1   MSAVIDDH---GHADHAHGPAKGLMRWVLTTNHKDIGTLYLWFAFAMFLLGGSFAMVIRA 57

Query: 61  ELFQPGLQLVNPELFNQLTTMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARMNNF 120
           ELFQPGLQ+V P  FNQ+TTMHGLIMVFGA+MPAFVG ANWMIPL IGA DMA  RMNNF
Sbjct: 58  ELFQPGLQIVQPAFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNF 117

Query: 121 SFWLMIPAAIMLVASFFMPGGAPAAGWTLYAPLTLQMGP-SMDAGIFAMHILGASSIMGS 179
           SFWL+  A ++LV++ F PGG P  GWT YAPL+    P S+   IFA+H++G SSIMG+
Sbjct: 118 SFWLLPAAFLLLVSTLFTPGGGPNFGWTFYAPLSTTYAPESVTFFIFAIHLMGISSIMGA 177

Query: 180 INIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFGTSFFN 239
           IN++ TILN+RAPGMTLMKMP+F WTWLITA+LLIAVMPVLAG +TM L D HFGTSFF+
Sbjct: 178 INVVATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFS 237

Query: 240 PAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVVPAFARKKLFGYASMVYATGSIAI 299
            AGGGDPV++QH+FWFFGHPEVYIMILPAFG VS ++P F+RK LFGY SMVYAT SIA 
Sbjct: 238 AAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPTFSRKPLFGYTSMVYATASIAF 297

Query: 300 LSFVVWAHHMFTTGMPVTGQLFFMYSTMLIAVPTGVKIFNWIATMWKGSMTFETPMLWAV 359
           LSF+VWAHHMF  G+P+ G+LFFMY+T+LIAVPTGVK+FNW++TMW+GS+TFETPML+AV
Sbjct: 298 LSFIVWAHHMFVVGIPLVGELFFMYATLLIAVPTGVKVFNWVSTMWQGSLTFETPMLFAV 357

Query: 360 GFIFVFTIGGFTGLILSVAPIDIQMQDTYYVVAHFHYVLVAGSLFAMFSGIYYWLPKWTG 419
            F+ +FTIGGF+GL+L++AP D Q  DTY+VVAHFHYVLV G++F +F+  YYWLPKWTG
Sbjct: 358 AFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTG 417

Query: 420 VMYSETRGKIHFWWSMISFNITFFPMHFLGLAGMPRRYADYPMQFADFNAIASVGAFGFG 479
            MY ET GK+HFW S +  N+ FFPMHF+GLAGMPRR  DY +QFADFN ++SVGAF FG
Sbjct: 418 HMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRVPDYNLQFADFNMVSSVGAFMFG 477

Query: 480 LAQVYFFLAVVVPAMRGKGEKAPQNPWEGAVGLEWEVPSPAPFHTFENPPKL 531
             Q+ FFL +V+  +RG G  AP  PW+GA GLEW +PSPAP+HTF  PP++
Sbjct: 478 ATQI-FFLFIVIKCIRG-GTPAPAKPWDGAEGLEWSIPSPAPYHTFTTPPEV 527