Pairwise Alignments

Query, 540 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 546 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Variovorax sp. SCN45

 Score = 1047 bits (2708), Expect = 0.0
 Identities = 500/546 (91%), Positives = 522/546 (95%), Gaps = 6/546 (1%)

Query: 1   MSAVLDHHD-----AHGHDDH-DHHAPTGWRRWVYATNHKDIGTLYLLFAFTMLMVGGVL 54
           MSAVLD H       H HD+H DHHAPTGWRRWV+ATNHKDIGTLYLLF+FTMLMVGGVL
Sbjct: 1   MSAVLDPHGHAVPGGHAHDEHHDHHAPTGWRRWVFATNHKDIGTLYLLFSFTMLMVGGVL 60

Query: 55  ALLIRAELFQPGLQLVNPELFNQLTTMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAF 114
           ALLIRAELFQPGLQLVNPELFNQ TTMHGLIMVFGAIMPAFVGFANWMIPLQ+GASDMAF
Sbjct: 61  ALLIRAELFQPGLQLVNPELFNQFTTMHGLIMVFGAIMPAFVGFANWMIPLQVGASDMAF 120

Query: 115 ARMNNFSFWLMIPAAIMLVASFFMPGGAPAAGWTLYAPLTLQMGPSMDAGIFAMHILGAS 174
           ARMNNFSFWL+IPAA+MLV SFFMPGGAPAAGWTLYAPLTLQMGPSMDAGIFAMHI+GAS
Sbjct: 121 ARMNNFSFWLLIPAALMLVGSFFMPGGAPAAGWTLYAPLTLQMGPSMDAGIFAMHIMGAS 180

Query: 175 SIMGSINIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFG 234
           SIMGSINIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFG
Sbjct: 181 SIMGSINIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFG 240

Query: 235 TSFFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVVPAFARKKLFGYASMVYAT 294
           TSFFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGI+SQVVPAFARKKLFGYASMVYAT
Sbjct: 241 TSFFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIISQVVPAFARKKLFGYASMVYAT 300

Query: 295 GSIAILSFVVWAHHMFTTGMPVTGQLFFMYSTMLIAVPTGVKIFNWIATMWKGSMTFETP 354
            SIAILSF+VWAHHMFTTGMP+TGQLFFMY+TMLIAVPT VKIFNWIATMW+GSMTFETP
Sbjct: 301 SSIAILSFIVWAHHMFTTGMPLTGQLFFMYATMLIAVPTAVKIFNWIATMWQGSMTFETP 360

Query: 355 MLWAVGFIFVFTIGGFTGLILSVAPIDIQMQDTYYVVAHFHYVLVAGSLFAMFSGIYYWL 414
           ML+AVGFIFVFT+GGFTGLIL+VAPID Q+QDTYYVVAHFHYVLVAGSLFAMFSG YYW+
Sbjct: 361 MLFAVGFIFVFTMGGFTGLILAVAPIDTQLQDTYYVVAHFHYVLVAGSLFAMFSGFYYWV 420

Query: 415 PKWTGVMYSETRGKIHFWWSMISFNITFFPMHFLGLAGMPRRYADYPMQFADFNAIASVG 474
           PKWTGVMY+ETRGK+HFWWS+ISFN+TFFPMHFLGLAGMPRRYADYPMQFADFNA+ASVG
Sbjct: 421 PKWTGVMYNETRGKVHFWWSLISFNVTFFPMHFLGLAGMPRRYADYPMQFADFNAVASVG 480

Query: 475 AFGFGLAQVYFFLAVVVPAMRGKGEKAPQNPWEGAVGLEWEVPSPAPFHTFENPPKLDAT 534
           AF FG AQVYFFL VV P MRGKGEKA Q PWEGA GLEWEVPSPAPFHTFENPPKLDAT
Sbjct: 481 AFFFGFAQVYFFLFVVFPTMRGKGEKAAQKPWEGAEGLEWEVPSPAPFHTFENPPKLDAT 540

Query: 535 ATKVIG 540
           ATKVIG
Sbjct: 541 ATKVIG 546