Pairwise Alignments

Query, 241 a.a., Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 227 a.a., DNA catabolic protein from Escherichia coli BL21

 Score = 84.7 bits (208), Expect = 1e-21
 Identities = 70/234 (29%), Positives = 99/234 (42%), Gaps = 16/234 (6%)

Query: 11  SLPGTCQVCD---AWPSSAVCEACAARFQDEGPRCAGCAQRVPLAVSMCGACLTRPAPAA 67
           ++PG C +C    A     +C  C+   + +   C  C      +   CG CL +P P  
Sbjct: 3   TVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPATHSHLPCGRCLQKPPP-- 60

Query: 68  LHACAAAVDYAYPWDGLIARFKFRQEPGWAGPFARRMLQT---PQADALLSSCDLVAPVP 124
                   DYA P   LI + KF +    A   +R +L      +    L   D +  VP
Sbjct: 61  WQRLVTVADYAPPLSLLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIISVP 120

Query: 125 LTPARLAERGYNQAWELVKALRRANAPTHQAPALADALVRLAETPDQHSLPREQRLRNLQ 184
           L   R   RG+NQ+  L + L R           ++A+ R   T  QH L    R RNL+
Sbjct: 121 LWQRRHWRRGFNQSDLLCQPLSR----WLHCQWDSEAVTRTRATATQHFLSARLRKRNLK 176

Query: 185 GVFAAHPLHVARLTGLHVLLVDDVTTTGATLQAAAQALLQAGAARVSALVFART 238
             F         + G H+++VDDV TTG+T+   AQ LL+ GAA V      RT
Sbjct: 177 NAFRLE----LPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLCRT 226