Pairwise Alignments

Query, 532 a.a., Choline dehydrogenase (EC 1.1.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 553 a.a., choline dehydrogenase from Pseudomonas fluorescens SBW25

 Score =  380 bits (977), Expect = e-110
 Identities = 221/529 (41%), Positives = 304/529 (57%), Gaps = 11/529 (2%)

Query: 3   SYDYIIVGGGTAGCVLANRLTASGRHRVLMLEAGGEPKSMWINIPAGFSKLLTNRQYNWR 62
           ++D+I+VGGG+AGCV A RL+      V +LEAGGE +S  + IPA    ++  +  NW 
Sbjct: 4   TFDFIVVGGGSAGCVAAGRLSEDPDTSVCLLEAGGEGRSSLVRIPAATVAMVPTKVNNWA 63

Query: 63  FQTEAEDNTNGRVISVPRGKGLGGSTLINGMIYVRGQPGDYDAWRDTGARGWSFEDVEPY 122
           F T A+    GR    PRGK LGGS+ IN MIYVRG   DYD W   G  GW ++DV PY
Sbjct: 64  FDTVAQAALLGRTGYQPRGKTLGGSSSINAMIYVRGHQWDYDHWASLGNPGWGYKDVLPY 123

Query: 123 FRKLERCKE-GGPTRGHAGPMRLEKVRERFPISDAFIQAANEDGLPFNDDYNAERQDGVG 181
           F + E  +       G  GP+ +  +R   P    F++AA E GLP NDD+N   Q+GVG
Sbjct: 124 FLRSEHNERLDDAWHGRDGPLWVSDLRSDNPFQQRFLEAARETGLPLNDDFNGAEQEGVG 183

Query: 182 YYEVTQSGGRRWSAYKGYLEPAL-QRKNLKVVTDAQVLRVDLAGKRCTGVTYRKGGQDVT 240
            Y+VTQ  G R+SA + YL P +  R NL V T AQV R+   G R  GV   + GQ   
Sbjct: 184 AYQVTQKHGERYSAARAYLLPHIGVRDNLSVETRAQVQRILFEGTRAVGVEVLQHGQVYV 243

Query: 241 VKAGIEVILAAGAIQSPQILELSGIGQPELLKRLGIPVEHALEGVGENYIDH----FATR 296
           ++A  EVILAAGA Q+PQ+L LSG+G    L+R GIP+ H L GVG+N  DH    F  +
Sbjct: 244 LRARREVILAAGAFQTPQLLMLSGVGPKVELQRHGIPLLHELPGVGQNLQDHPDFVFVYK 303

Query: 297 MNWRVKGTVTLNEMSRNWRLGLAVSQYFAKRTGILTLGTGLVNAFVRTRPEMATPDAQFF 356
            N      V+L    +  +    + ++  +R G+LT       AF++T   +  PD Q  
Sbjct: 304 TNSLDAMGVSLGGCLKILK---EIWRFRQERRGMLTSNFAEGGAFLKTCDTLDKPDIQLH 360

Query: 357 FVHASYKNAAERVLDRQPGMTIGVTQLRPQSIGSIHIKSRDVSAGPSIRPNFLSSTVDQE 416
           FV A  ++ A R L    G++  V  LRP+S GS+ + S D  A P I P FL    D E
Sbjct: 361 FVVAPVEDHA-RTLRMGHGLSCHVCLLRPRSRGSVTLASNDPQAAPLIDPAFLKDPQDLE 419

Query: 417 CMVRSMEIARRIVTRPAMKKYVVEEMSPGENVKSDADWLAFARANGQTIYHPIGTCRMGD 476
            MV + ++ RR++  P++ K++   +   E V++D       R    ++YHP+GTCRMGD
Sbjct: 420 DMVAAFKLTRRLMQAPSLAKWITRTLYT-EGVETDEQIRTLLRERTDSVYHPVGTCRMGD 478

Query: 477 DDLAVVDPRLKVRGLQGLRVVDASVMPKMVSGNIQAAVMMVAERGADLV 525
           D LAVVD +L+V GLQ LR+VDAS+MP ++ GN  A  +M+AE+  DL+
Sbjct: 479 DPLAVVDAQLRVHGLQALRIVDASIMPTLIGGNTNAPTIMIAEKAVDLI 527