Pairwise Alignments

Query, 532 a.a., Choline dehydrogenase (EC 1.1.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 559 a.a., choline dehydrogenase from Pectobacterium carotovorum WPP14

 Score =  351 bits (900), Expect = e-101
 Identities = 205/528 (38%), Positives = 302/528 (57%), Gaps = 7/528 (1%)

Query: 4   YDYIIVGGGTAGCVLANRLTASGRHRVLMLEAGGEPKSMWIN--IPAGFSKLLTNRQYNW 61
           YDYII+G G+AG VLA RLT      VL+LEAGG    +     +PA  +  L  ++YNW
Sbjct: 3   YDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 62

Query: 62  RFQTEAEDNTNGRVISVPRGKGLGGSTLINGMIYVRGQPGDYDAWRDT-GARGWSFEDVE 120
            ++T+ E + N R +   RGKGLGGS+LINGM Y+RG   D+D W    G   WS+ D  
Sbjct: 63  AYETDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWATMPGLEDWSYLDCL 122

Query: 121 PYFRKLERCKEGGPT-RGHAGPMRLEKVRE-RFPISDAFIQAANEDGLPFNDDYNAERQD 178
           PYFRK E    G     G +GP+ +   +     +  A ++A  + G P  DD N  +Q+
Sbjct: 123 PYFRKAETRDVGSNDYHGASGPVSVTTPKMGNNELFHAMVEAGVQAGYPRTDDLNGYQQE 182

Query: 179 GVGYYEVTQSG-GRRWSAYKGYLEPALQRKNLKVVTDAQVLRVDLAGKRCTGVTYRKGGQ 237
           G G  + T +  GRR S  +GYL+ A  RKNL +VT A   ++   GKR  GV Y KG  
Sbjct: 183 GFGPMDRTVTPKGRRASTARGYLDQAKGRKNLTIVTHALTDKILFDGKRAVGVAYFKGES 242

Query: 238 DVTVKAGIEVILAAGAIQSPQILELSGIGQPELLKRLGIPVEHALEGVGENYIDHFATRM 297
             T KA  EV+L AGAI SPQIL+ SG+G  +LL+RL IPV H L GVGEN  DH    +
Sbjct: 243 AQTAKARREVLLCAGAIASPQILQRSGVGPKDLLQRLDIPVVHDLPGVGENLQDHLEMYL 302

Query: 298 NWRVKGTVTLNEMSRNWRLGLAVSQYFAKRTGILTLGTGLVNAFVRTRPEMATPDAQFFF 357
            +  K  V+L    + +      +++    TG+          F+R+R E A P+ Q+ F
Sbjct: 303 QYACKEPVSLYPALQWFNQPKIGAEWLFNGTGVGASNQFEAGGFIRSRDEFAWPNIQYHF 362

Query: 358 VHASYKNAAERVLDRQPGMTIGVTQLRPQSIGSIHIKSRDVSAGPSIRPNFLSSTVDQEC 417
           +  +        + ++ G    V  +R  S G + ++S+D    PSI  N++S+  D + 
Sbjct: 363 LPVAINYNGSNAV-KEHGFQAHVGSMRSLSRGRVQVRSKDAREHPSILFNYMSTEQDWQE 421

Query: 418 MVRSMEIARRIVTRPAMKKYVVEEMSPGENVKSDADWLAFARANGQTIYHPIGTCRMGDD 477
              ++ I R I+ +PA+ KY   E+SPG  V++D +   F R + +T +HP  +C+MG+D
Sbjct: 422 FRDAIRITREIMAQPALDKYRGREISPGPEVQTDDELDEFIRTHAETAFHPSCSCKMGED 481

Query: 478 DLAVVDPRLKVRGLQGLRVVDASVMPKMVSGNIQAAVMMVAERGADLV 525
           ++AVVD + +V G++GLRVVDAS+MP++++GN+ A  +M+AE+ AD +
Sbjct: 482 EMAVVDGQGRVHGMEGLRVVDASIMPQIITGNLNATTIMIAEKIADRI 529