Pairwise Alignments

Query, 324 a.a., TRAP transporter solute receptor, unknown substrate 5 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 322 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 11/262 (4%)

Query: 1   MKRRLFSLSVAAATMAMSLPALAQTKWDLPAAYPATNFHTVNLTAFANDVDKATGGKLKI 60
           ++R LF+L+V    ++     L          YP        +   +  +D+ +GGK KI
Sbjct: 3   LQRHLFALAVGLLALSTQAAELRSADVHNSDDYPTV----AAVRHMSQLLDQRSGGKYKI 58

Query: 61  TVHAGASLFKAPEIKRAVQGGQAQIGEILLAAYQNEWQMFGADGLPFLATSYADSMKLYK 120
            V   ++L    E    V+ G   +  + +++            +PFL  S      +  
Sbjct: 59  KVFNKSALGSEKETLDQVKIGALDMNRVNISSLNAICPKSLVPTMPFLFRSTEHMRAVLD 118

Query: 121 AQKPILEKKLA---EQGMTLLYTVAWPPQGIYSKKPVASAADLKGSKWRAY-SPATSRIA 176
              PI E+ L     QG+  L       + IY+KKPV S AD+KG K R   S     +A
Sbjct: 119 G--PIGEEILKGCEHQGLVGLAFYDSGARSIYAKKPVRSLADVKGMKIRVQQSDLWVAVA 176

Query: 177 ELVGAQPVTVQAAELSQALATGVVESNMTSGATGVDSKLYEHLKYYYDVQAWLPKNAIIM 236
             +GA    +  AE+   L TGV+++   +  +    K YE +K Y   Q  +    +++
Sbjct: 177 TAMGANATPMATAEVYTGLKTGVIDAAENNEPSYEGFKHYEAVKVYSYTQHSMAPEMLVI 236

Query: 237 NKRAFDALDKPTQDAVLKAGAE 258
           +K  FD +  P   A+ +A A+
Sbjct: 237 SKAVFDKM-SPADQALFRAAAK 257